Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1788

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
1,858,883	+		Dshi_1786	0.51	-0.4
1,858,883	+		Dshi_1786	0.51	-0.9
1,859,070	+				-0.4
1,859,115	-				+0.2
1,860,050	+		Dshi_1788	0.34	-1.1
1,860,086	+		Dshi_1788	0.41	-1.4
1,860,100	-		Dshi_1788	0.43	+0.1
1,860,210	-		Dshi_1788	0.65	-0.8
1,860,313	+		Dshi_1788	0.84	-0.0
1,860,321	-		Dshi_1788	0.86	-0.8
1,860,321	-		Dshi_1788	0.86	-3.1
1,860,321	-		Dshi_1788	0.86	-0.7
1,860,344	+				+1.0
1,860,352	-				-1.1
1,860,354	+				-1.1
1,860,356	+				-2.1
1,860,356	+				-2.1
1,860,378	-				-0.8
1,860,380	-				-0.5
1,860,406	-				-1.6
1,860,420	-				-0.2
1,860,444	+				-1.8
1,860,453	+				-1.9
1,860,453	+				+1.4
1,860,461	-				-1.6
1,860,474	+				+0.0
1,860,486	+				-1.5
1,860,507	+				-1.7
1,861,149	-				-0.9