Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1665

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
1,730,216	+				+1.0
1,730,270	+		Dshi_1664	0.13	-0.1
1,730,284	-		Dshi_1664	0.15	+0.1
1,730,309	+		Dshi_1664	0.17	-0.2
1,730,409	-		Dshi_1664	0.26	-0.4
1,730,535	+		Dshi_1664	0.38	-1.0
1,730,559	-		Dshi_1664	0.40	-0.1
1,730,579	+		Dshi_1664	0.42	+0.5
1,730,587	-		Dshi_1664	0.43	-0.4
1,730,587	-		Dshi_1664	0.43	-1.3
1,730,857	-		Dshi_1664	0.68	+0.4
1,730,929	-		Dshi_1664	0.74	-0.4
1,731,000	-		Dshi_1664	0.81	+1.7
1,731,043	+		Dshi_1664	0.85	+0.7
1,731,102	+				+0.1
1,731,188	-				+0.1
1,731,188	-				-0.7
1,731,188	-				+0.3
1,731,213	-				+0.6
1,731,266	-				+0.9
1,731,266	-				+0.1
1,731,281	-				-1.7
1,731,281	-				-0.5
1,731,286	+				+0.1
1,731,294	-				+0.4
1,731,298	+				+0.3
1,731,332	-				+1.0
1,731,415	-		Dshi_1665	0.12	+1.9
1,731,477	-		Dshi_1665	0.16	-0.3
1,731,481	+		Dshi_1665	0.16	-0.6
1,731,554	+		Dshi_1665	0.20	-0.5
1,731,589	-		Dshi_1665	0.22	-0.4
1,731,717	+		Dshi_1665	0.30	+0.3
1,731,804	+		Dshi_1665	0.35	+0.5
1,732,012	+		Dshi_1665	0.47	-0.4
1,732,022	+		Dshi_1665	0.48	+0.6
1,732,060	-		Dshi_1665	0.50	+0.7
1,732,060	-		Dshi_1665	0.50	-0.3
1,732,114	-		Dshi_1665	0.53	-1.3
1,732,168	+		Dshi_1665	0.57	+1.3
1,732,173	+		Dshi_1665	0.57	-0.7
1,732,196	+		Dshi_1665	0.58	+0.1
1,732,239	-		Dshi_1665	0.61	-0.1
1,732,250	+		Dshi_1665	0.62	-0.1
1,732,250	+		Dshi_1665	0.62	-0.3
1,732,275	-		Dshi_1665	0.63	+0.7
1,732,382	+		Dshi_1665	0.69	+0.2
1,732,382	+		Dshi_1665	0.69	+0.3
1,732,382	+		Dshi_1665	0.69	-0.1
1,732,432	+		Dshi_1665	0.72	-0.2
1,732,492	+		Dshi_1665	0.76	+0.2
1,732,492	-		Dshi_1665	0.76	+0.6
1,732,522	+		Dshi_1665	0.78	+1.8
1,732,613	-		Dshi_1665	0.83	+0.4
1,732,628	+		Dshi_1665	0.84	-0.1
1,732,687	+		Dshi_1665	0.87	+0.4
1,732,767	+				+1.5
1,732,874	-				+0.3
1,732,918	+				+0.1
1,732,921	-				+0.2
1,732,945	+				+0.3
1,733,021	-				-0.3
1,733,087	-		Dshi_1666	0.13	-0.3
1,733,092	+		Dshi_1666	0.15	-1.1
1,733,099	+		Dshi_1666	0.16	-0.0
1,733,102	-		Dshi_1666	0.17	-0.0
1,733,111	-		Dshi_1666	0.19	+0.1
1,733,131	-		Dshi_1666	0.23	-0.7
1,733,131	-		Dshi_1666	0.23	+0.4
1,733,200	-		Dshi_1666	0.39	+0.1
1,733,286	+		Dshi_1666	0.58	+0.0
1,733,347	-		Dshi_1666	0.72	-0.3
1,733,438	-				-0.2
1,733,469	+				+0.2
1,733,476	+				+0.1
1,733,558	+				-0.2
1,733,572	-				+1.0
1,733,609	-				+0.7
1,733,634	-				-0.1
1,733,665	+				-0.6
1,733,670	+				+0.9
1,733,670	+				+0.0
1,733,678	-				-0.7
1,733,754	+				+0.1