Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1622

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
1,685,984	-		Dshi_1621	0.14	-1.5
1,686,060	-		Dshi_1621	0.22	-0.0
1,686,069	+		Dshi_1621	0.23	-0.9
1,686,077	-		Dshi_1621	0.24	+0.5
1,686,077	-		Dshi_1621	0.24	+0.0
1,686,162	+		Dshi_1621	0.33	-0.5
1,686,222	+		Dshi_1621	0.39	-0.6
1,686,278	-		Dshi_1621	0.45	-0.3
1,686,306	-		Dshi_1621	0.48	+0.6
1,686,369	-		Dshi_1621	0.55	-0.1
1,686,408	+		Dshi_1621	0.59	-0.5
1,686,485	+		Dshi_1621	0.67	-1.3
1,686,587	-		Dshi_1621	0.78	+0.1
1,686,609	-		Dshi_1621	0.80	-1.1
1,686,609	-		Dshi_1621	0.80	+0.8
1,686,609	-		Dshi_1621	0.80	+0.4
1,686,653	+		Dshi_1621	0.85	+2.2
1,686,686	-		Dshi_1621	0.88	-1.5
1,686,703	+		Dshi_1621	0.90	+0.2
1,686,745	-				+0.3
1,686,758	+				+0.4
1,686,819	-				+0.2
1,686,824	-				-1.7
1,686,824	-				+0.3
1,686,909	-				+0.7
1,687,100	-		Dshi_1622	0.14	-1.3
1,687,142	-		Dshi_1622	0.17	-0.0
1,687,158	+		Dshi_1622	0.18	+0.5
1,687,317	+		Dshi_1622	0.28	+0.1
1,687,379	+		Dshi_1622	0.32	-0.4
1,687,569	+		Dshi_1622	0.45	+0.4
1,687,710	+		Dshi_1622	0.54	-0.4
1,687,906	+		Dshi_1622	0.67	-0.6
1,688,042	-		Dshi_1622	0.76	+2.0
1,688,043	-		Dshi_1622	0.76	+0.3
1,688,048	-		Dshi_1622	0.76	+0.9
1,688,093	+		Dshi_1622	0.79	+0.5
1,688,093	+		Dshi_1622	0.79	+0.5
1,688,189	-		Dshi_1622	0.86	+0.0
1,688,343	-				-0.4
1,688,449	-				-0.1
1,688,471	-				+0.3
1,688,481	+				+0.4
1,688,499	-				-0.3
1,688,530	+				-0.2
1,688,620	-				-0.3
1,688,659	-				+2.5
1,688,815	+				-0.2
1,688,823	-				+0.3
1,688,923	-				+0.2
1,688,923	-				-0.3