Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2617

Experiment: sodium carbonate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium carbonate 0.0125 M
3,074,677	+		Pf6N2E2_2616	0.20	+0.2
3,074,677	+		Pf6N2E2_2616	0.20	-1.6
3,074,677	+		Pf6N2E2_2616	0.20	-1.1
3,074,677	+		Pf6N2E2_2616	0.20	+1.5
3,074,677	+		Pf6N2E2_2616	0.20	-1.7
3,074,678	-		Pf6N2E2_2616	0.20	+0.3
3,074,678	-		Pf6N2E2_2616	0.20	+1.3
3,074,678	-		Pf6N2E2_2616	0.20	+0.9
3,074,678	-		Pf6N2E2_2616	0.20	+0.3
3,074,678	-		Pf6N2E2_2616	0.20	+0.3
3,074,685	+		Pf6N2E2_2616	0.20	-0.0
3,074,685	+		Pf6N2E2_2616	0.20	+1.0
3,074,686	-		Pf6N2E2_2616	0.20	-0.8
3,074,691	-		Pf6N2E2_2616	0.21	-0.6
3,074,806	+		Pf6N2E2_2616	0.30	+0.4
3,074,807	-		Pf6N2E2_2616	0.30	+0.4
3,074,809	+		Pf6N2E2_2616	0.30	+1.0
3,074,809	+		Pf6N2E2_2616	0.30	-0.7
3,074,810	-		Pf6N2E2_2616	0.30	+1.1
3,074,810	-		Pf6N2E2_2616	0.30	-0.8
3,074,810	-		Pf6N2E2_2616	0.30	+0.1
3,075,004	+		Pf6N2E2_2616	0.46	+0.4
3,075,004	+		Pf6N2E2_2616	0.46	+1.3
3,075,005	-		Pf6N2E2_2616	0.46	-0.3
3,075,005	-		Pf6N2E2_2616	0.46	+1.4
3,075,005	-		Pf6N2E2_2616	0.46	-0.3
3,075,005	-		Pf6N2E2_2616	0.46	-0.5
3,075,010	+		Pf6N2E2_2616	0.47	+1.5
3,075,022	+		Pf6N2E2_2616	0.48	-0.7
3,075,142	-		Pf6N2E2_2616	0.58	+1.2
3,075,409	+		Pf6N2E2_2616	0.79	-0.5
3,075,454	+		Pf6N2E2_2616	0.83	+0.4
3,075,455	-		Pf6N2E2_2616	0.83	+0.1
3,075,460	+		Pf6N2E2_2616	0.83	-0.2
3,075,460	+		Pf6N2E2_2616	0.83	-0.5
3,075,461	-		Pf6N2E2_2616	0.84	-0.8
3,075,461	-		Pf6N2E2_2616	0.84	+0.1
3,075,461	-		Pf6N2E2_2616	0.84	+1.3
3,075,461	-		Pf6N2E2_2616	0.84	-2.2
3,075,461	-		Pf6N2E2_2616	0.84	-0.2
3,075,493	+		Pf6N2E2_2616	0.86	+0.5
3,075,494	-		Pf6N2E2_2616	0.86	-2.1
3,075,494	-		Pf6N2E2_2616	0.86	-0.1
3,075,587	-				+1.4
3,075,587	-				+0.4
3,075,587	-				+1.1
3,075,609	-				+0.1
3,075,663	-				+1.7
3,075,724	+		Pf6N2E2_2617	0.12	+0.4
3,075,725	-		Pf6N2E2_2617	0.12	+0.9
3,075,799	-		Pf6N2E2_2617	0.25	+1.4
3,075,809	-		Pf6N2E2_2617	0.27	+0.9
3,075,816	+		Pf6N2E2_2617	0.28	+0.3
3,075,816	+		Pf6N2E2_2617	0.28	+0.3
3,075,817	-		Pf6N2E2_2617	0.28	-1.3
3,075,817	-		Pf6N2E2_2617	0.28	+0.2
3,075,947	+		Pf6N2E2_2617	0.51	+0.3
3,075,947	+		Pf6N2E2_2617	0.51	+0.5
3,075,947	+		Pf6N2E2_2617	0.51	+0.7
3,075,948	-		Pf6N2E2_2617	0.52	+0.1
3,076,233	-				-0.4
3,076,399	+		Pf6N2E2_2618	0.17	+0.5
3,076,399	+		Pf6N2E2_2618	0.17	+0.3
3,076,399	+		Pf6N2E2_2618	0.17	-1.5
3,076,399	+		Pf6N2E2_2618	0.17	-0.2
3,076,399	+		Pf6N2E2_2618	0.17	-0.5
3,076,400	-		Pf6N2E2_2618	0.17	+0.5
3,076,400	-		Pf6N2E2_2618	0.17	+0.1
3,076,400	-		Pf6N2E2_2618	0.17	+0.5
3,076,400	-		Pf6N2E2_2618	0.17	+0.3
3,076,400	-		Pf6N2E2_2618	0.17	-0.2
3,076,400	-		Pf6N2E2_2618	0.17	-0.6
3,076,539	-		Pf6N2E2_2618	0.30	-0.3
3,076,558	+		Pf6N2E2_2618	0.32	+0.0
3,076,559	-		Pf6N2E2_2618	0.32	-0.6
3,076,559	-		Pf6N2E2_2618	0.32	+0.5
3,076,559	-		Pf6N2E2_2618	0.32	+0.3
3,076,559	-		Pf6N2E2_2618	0.32	-1.1
3,076,618	+		Pf6N2E2_2618	0.37	+0.7
3,076,618	+		Pf6N2E2_2618	0.37	-0.3
3,076,618	+		Pf6N2E2_2618	0.37	+0.8
3,076,699	+		Pf6N2E2_2618	0.45	+0.6
3,076,776	-		Pf6N2E2_2618	0.52	-1.5
3,076,880	+		Pf6N2E2_2618	0.62	+0.4
3,076,880	+		Pf6N2E2_2618	0.62	+0.3
3,076,881	-		Pf6N2E2_2618	0.62	+0.7
3,076,881	-		Pf6N2E2_2618	0.62	+1.1
3,076,976	+		Pf6N2E2_2618	0.71	-0.5
3,076,976	+		Pf6N2E2_2618	0.71	-0.0
3,076,976	+		Pf6N2E2_2618	0.71	-0.7
3,076,977	-		Pf6N2E2_2618	0.71	-1.1
3,076,977	-		Pf6N2E2_2618	0.71	+0.3
3,076,977	-		Pf6N2E2_2618	0.71	+0.1
3,076,981	-		Pf6N2E2_2618	0.71	-1.3