Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2165

Experiment: sodium carbonate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium carbonate 0.0125 M
2,569,254	-		Pf6N2E2_2164	0.46	+1.3
2,569,289	+		Pf6N2E2_2164	0.48	+1.1
2,569,289	+		Pf6N2E2_2164	0.48	+0.3
2,569,290	-		Pf6N2E2_2164	0.48	-0.1
2,569,466	+		Pf6N2E2_2164	0.60	-0.2
2,569,626	+		Pf6N2E2_2164	0.70	+0.7
2,569,626	+		Pf6N2E2_2164	0.70	-0.4
2,569,626	+		Pf6N2E2_2164	0.70	+0.3
2,569,626	+		Pf6N2E2_2164	0.70	+0.1
2,569,627	-		Pf6N2E2_2164	0.70	-0.1
2,569,627	-		Pf6N2E2_2164	0.70	-0.8
2,569,627	-		Pf6N2E2_2164	0.70	+0.4
2,569,627	-		Pf6N2E2_2164	0.70	-0.6
2,569,627	-		Pf6N2E2_2164	0.70	+1.6
2,569,627	-		Pf6N2E2_2164	0.70	+0.4
2,569,627	-		Pf6N2E2_2164	0.70	-3.1
2,569,643	+		Pf6N2E2_2164	0.71	+2.1
2,569,643	+		Pf6N2E2_2164	0.71	+0.2
2,569,771	+		Pf6N2E2_2164	0.79	+0.3
2,569,771	+		Pf6N2E2_2164	0.79	-1.0
2,569,772	-		Pf6N2E2_2164	0.79	-0.1
2,570,018	+				+0.4
2,570,033	+				-1.5
2,570,033	+				-1.5
2,570,034	-				+1.0
2,570,034	-				-1.3
2,570,055	-				+1.0
2,570,055	-				+0.7
2,570,055	-				-0.8
2,570,151	+				+0.2
2,570,152	-				+0.4
2,570,152	-				+0.7
2,570,218	+				-0.1
2,570,218	+				+0.5
2,570,219	-				-0.8
2,570,219	-				-0.2
2,570,219	-				+1.0
2,570,219	-				-0.5
2,570,219	-				-0.2
2,570,248	-		Pf6N2E2_2165	0.11	-0.6
2,570,248	-		Pf6N2E2_2165	0.11	-0.2
2,570,248	-		Pf6N2E2_2165	0.11	+1.9
2,570,344	-		Pf6N2E2_2165	0.21	+1.1
2,570,344	-		Pf6N2E2_2165	0.21	-0.2
2,570,344	-		Pf6N2E2_2165	0.21	+1.3
2,570,344	-		Pf6N2E2_2165	0.21	+1.1
2,570,344	-		Pf6N2E2_2165	0.21	-0.7
2,570,381	-		Pf6N2E2_2165	0.26	-0.5
2,570,405	-		Pf6N2E2_2165	0.28	-0.1
2,570,405	-		Pf6N2E2_2165	0.28	+0.2
2,570,405	-		Pf6N2E2_2165	0.28	-0.4
2,570,405	-		Pf6N2E2_2165	0.28	+1.3
2,570,405	-		Pf6N2E2_2165	0.28	+0.7
2,570,405	-		Pf6N2E2_2165	0.28	-0.6
2,570,406	+		Pf6N2E2_2165	0.28	-1.0
2,570,407	-		Pf6N2E2_2165	0.28	-0.6
2,570,407	-		Pf6N2E2_2165	0.28	-0.8
2,570,407	-		Pf6N2E2_2165	0.28	+0.2
2,570,407	-		Pf6N2E2_2165	0.28	+0.4
2,570,407	-		Pf6N2E2_2165	0.28	+0.1
2,570,408	+		Pf6N2E2_2165	0.28	+1.3
2,570,408	+		Pf6N2E2_2165	0.28	+0.0
2,570,409	-		Pf6N2E2_2165	0.29	+1.1
2,570,409	-		Pf6N2E2_2165	0.29	-0.0
2,570,409	-		Pf6N2E2_2165	0.29	-0.3
2,570,409	-		Pf6N2E2_2165	0.29	+0.1
2,570,409	-		Pf6N2E2_2165	0.29	+0.5
2,570,409	-		Pf6N2E2_2165	0.29	+0.4
2,570,409	-		Pf6N2E2_2165	0.29	-2.4
2,570,485	+		Pf6N2E2_2165	0.37	-1.5
2,570,485	+		Pf6N2E2_2165	0.37	-0.5
2,570,486	-		Pf6N2E2_2165	0.37	+0.6
2,570,486	-		Pf6N2E2_2165	0.37	-0.2
2,570,486	-		Pf6N2E2_2165	0.37	+0.5
2,570,486	-		Pf6N2E2_2165	0.37	+0.5
2,570,486	-		Pf6N2E2_2165	0.37	-0.5
2,570,486	-		Pf6N2E2_2165	0.37	+0.3
2,570,486	-		Pf6N2E2_2165	0.37	+1.3
2,570,626	+		Pf6N2E2_2165	0.52	-0.7
2,570,626	+		Pf6N2E2_2165	0.52	+2.1
2,570,627	-		Pf6N2E2_2165	0.52	+0.7
2,570,627	-		Pf6N2E2_2165	0.52	+0.5
2,570,660	-		Pf6N2E2_2165	0.56	+0.1
2,570,660	-		Pf6N2E2_2165	0.56	+0.1
2,570,660	-		Pf6N2E2_2165	0.56	+0.3
2,570,670	+		Pf6N2E2_2165	0.57	+0.6
2,570,670	+		Pf6N2E2_2165	0.57	+1.2
2,570,671	-		Pf6N2E2_2165	0.57	-0.4
2,570,671	-		Pf6N2E2_2165	0.57	+0.4
2,570,671	-		Pf6N2E2_2165	0.57	+1.2
2,570,671	-		Pf6N2E2_2165	0.57	-1.1
2,570,680	+		Pf6N2E2_2165	0.58	-1.3
2,570,681	-		Pf6N2E2_2165	0.58	-0.4
2,570,681	-		Pf6N2E2_2165	0.58	+1.3
2,570,681	-		Pf6N2E2_2165	0.58	-1.0
2,570,850	+		Pf6N2E2_2165	0.76	+0.1
2,570,850	+		Pf6N2E2_2165	0.76	-1.3
2,570,850	+		Pf6N2E2_2165	0.76	+1.3
2,570,850	+		Pf6N2E2_2165	0.76	-0.8
2,570,851	-		Pf6N2E2_2165	0.77	+1.1
2,570,851	-		Pf6N2E2_2165	0.77	-0.1
2,570,851	-		Pf6N2E2_2165	0.77	+1.3
2,570,851	-		Pf6N2E2_2165	0.77	+0.7
2,570,851	-		Pf6N2E2_2165	0.77	+0.2
2,570,851	-		Pf6N2E2_2165	0.77	-0.9
2,570,854	+		Pf6N2E2_2165	0.77	-0.5
2,570,854	+		Pf6N2E2_2165	0.77	+0.1
2,570,854	+		Pf6N2E2_2165	0.77	+0.9
2,570,854	+		Pf6N2E2_2165	0.77	+1.3
2,570,854	+		Pf6N2E2_2165	0.77	-0.3
2,570,854	+		Pf6N2E2_2165	0.77	-0.9
2,570,854	+		Pf6N2E2_2165	0.77	-0.7
2,570,855	-		Pf6N2E2_2165	0.77	-1.0
2,570,855	-		Pf6N2E2_2165	0.77	-1.3
2,570,855	-		Pf6N2E2_2165	0.77	-0.5
2,570,855	-		Pf6N2E2_2165	0.77	-0.4
2,570,855	-		Pf6N2E2_2165	0.77	+1.1
2,570,855	-		Pf6N2E2_2165	0.77	-0.2
2,570,951	+		Pf6N2E2_2165	0.87	-0.3
2,570,951	+		Pf6N2E2_2165	0.87	-0.7
2,570,951	+		Pf6N2E2_2165	0.87	-2.3
2,570,951	+		Pf6N2E2_2165	0.87	+0.9
2,570,952	-		Pf6N2E2_2165	0.88	+1.1
2,570,952	-		Pf6N2E2_2165	0.88	+1.1
2,570,952	-		Pf6N2E2_2165	0.88	-0.3
2,570,952	-		Pf6N2E2_2165	0.88	-0.1
2,570,952	-		Pf6N2E2_2165	0.88	+0.7
2,570,952	-		Pf6N2E2_2165	0.88	+0.4
2,570,952	-		Pf6N2E2_2165	0.88	+1.1
2,570,952	-		Pf6N2E2_2165	0.88	-0.6
2,571,019	+				+0.4
2,571,020	-				+0.3
2,571,020	-				+1.1
2,571,020	-				+1.1
2,571,020	-				+0.3
2,571,021	+				+0.8
2,571,021	+				+0.4
2,571,021	+				+1.0
2,571,022	-				+1.1
2,571,022	-				+0.5
2,571,022	-				+0.5
2,571,054	+				+0.3
2,571,062	+				-0.1
2,571,063	-				+0.1
2,571,171	+				+1.0
2,571,171	+				+0.2
2,571,171	+				-1.1
2,571,172	-				+0.9
2,571,172	-				-0.2
2,571,172	-				-0.0
2,571,259	-		Pf6N2E2_2166	0.17	-0.1
2,571,259	-		Pf6N2E2_2166	0.17	+0.5
2,571,498	+		Pf6N2E2_2166	0.42	+0.7
2,571,498	+		Pf6N2E2_2166	0.42	-0.7
2,571,498	+		Pf6N2E2_2166	0.42	-0.5
2,571,498	+		Pf6N2E2_2166	0.42	-0.3
2,571,498	+		Pf6N2E2_2166	0.42	-0.4
2,571,499	-		Pf6N2E2_2166	0.42	-0.3
2,571,499	-		Pf6N2E2_2166	0.42	+1.0
2,571,499	-		Pf6N2E2_2166	0.42	+0.3
2,571,499	-		Pf6N2E2_2166	0.42	+0.3
2,571,499	-		Pf6N2E2_2166	0.42	+0.4
2,571,499	-		Pf6N2E2_2166	0.42	+0.7
2,571,499	-		Pf6N2E2_2166	0.42	+0.2
2,571,500	+		Pf6N2E2_2166	0.42	-0.0
2,571,500	+		Pf6N2E2_2166	0.42	-1.7
2,571,500	+		Pf6N2E2_2166	0.42	-1.1
2,571,500	+		Pf6N2E2_2166	0.42	+1.0
2,571,500	+		Pf6N2E2_2166	0.42	-0.1
2,571,500	+		Pf6N2E2_2166	0.42	+0.5
2,571,501	-		Pf6N2E2_2166	0.42	-1.4
2,571,501	-		Pf6N2E2_2166	0.42	+0.4
2,571,501	-		Pf6N2E2_2166	0.42	+0.5
2,571,502	+		Pf6N2E2_2166	0.43	+0.1
2,571,502	+		Pf6N2E2_2166	0.43	+0.4
2,571,502	+		Pf6N2E2_2166	0.43	+0.5
2,571,502	+		Pf6N2E2_2166	0.43	-0.9
2,571,503	-		Pf6N2E2_2166	0.43	+0.3
2,571,503	-		Pf6N2E2_2166	0.43	-0.9
2,571,535	-		Pf6N2E2_2166	0.46	+0.2
2,571,535	-		Pf6N2E2_2166	0.46	-0.5
2,571,718	-		Pf6N2E2_2166	0.65	+0.0
2,571,745	-		Pf6N2E2_2166	0.68	+0.8
2,571,745	-		Pf6N2E2_2166	0.68	+0.1
2,571,838	+		Pf6N2E2_2166	0.78	-0.4
2,571,839	-		Pf6N2E2_2166	0.78	+0.6
2,571,839	-		Pf6N2E2_2166	0.78	+1.9
2,571,839	-		Pf6N2E2_2166	0.78	+0.7
2,571,981	-				+0.5
2,571,999	+				-0.2
2,572,000	-				+0.7
2,572,000	-				-0.0
2,572,000	-				+0.5
2,572,020	-				+1.3
2,572,020	-				+0.3
2,572,044	-				-1.2
2,572,044	-				+0.7
2,572,044	-				+1.0
2,572,055	+				-0.6
2,572,056	-				+0.7
2,572,056	-				+0.0
2,572,056	-				-0.1