Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03001 and H281DRAFT_03002 are separated by 74 nucleotides H281DRAFT_03002 and H281DRAFT_03003 are separated by 10 nucleotides H281DRAFT_03003 and H281DRAFT_03004 are separated by 371 nucleotides
H281DRAFT_03001: H281DRAFT_03001 - Autotransporter adhesin, at 24,296 to 27,154
_03001
H281DRAFT_03002: H281DRAFT_03002 - hypothetical protein, at 27,229 to 27,357
_03002
H281DRAFT_03003: H281DRAFT_03003 - Cyanate permease, at 27,368 to 28,771
_03003
H281DRAFT_03004: H281DRAFT_03004 - MFS transporter, MHS family, shikimate and dehydroshikimate transport protein, at 29,143 to 30,459
_03004
Position (kb) 27
28
29 Strain fitness (log2 ratio) -1
0
1 at 26.514 kb on + strand, within H281DRAFT_03001 at 26.654 kb on + strand, within H281DRAFT_03001 at 26.654 kb on + strand, within H281DRAFT_03001 at 26.675 kb on + strand, within H281DRAFT_03001 at 26.676 kb on - strand, within H281DRAFT_03001 at 26.676 kb on - strand, within H281DRAFT_03001 at 26.820 kb on + strand, within H281DRAFT_03001 at 26.845 kb on + strand, within H281DRAFT_03001 at 26.846 kb on - strand, within H281DRAFT_03001 at 26.846 kb on - strand, within H281DRAFT_03001 at 27.026 kb on + strand at 27.027 kb on - strand at 27.027 kb on - strand at 27.106 kb on + strand at 27.107 kb on - strand at 27.266 kb on + strand, within H281DRAFT_03002 at 27.296 kb on + strand, within H281DRAFT_03002 at 27.296 kb on + strand, within H281DRAFT_03002 at 27.296 kb on + strand, within H281DRAFT_03002 at 27.297 kb on - strand, within H281DRAFT_03002 at 27.369 kb on + strand at 27.370 kb on - strand at 27.537 kb on + strand, within H281DRAFT_03003 at 27.640 kb on - strand, within H281DRAFT_03003 at 27.669 kb on + strand, within H281DRAFT_03003 at 27.670 kb on - strand, within H281DRAFT_03003 at 27.690 kb on + strand, within H281DRAFT_03003 at 27.690 kb on + strand, within H281DRAFT_03003 at 27.747 kb on + strand, within H281DRAFT_03003 at 27.747 kb on + strand, within H281DRAFT_03003 at 27.748 kb on - strand, within H281DRAFT_03003 at 27.748 kb on - strand, within H281DRAFT_03003 at 27.780 kb on + strand, within H281DRAFT_03003 at 27.780 kb on + strand, within H281DRAFT_03003 at 27.780 kb on + strand, within H281DRAFT_03003 at 27.781 kb on - strand, within H281DRAFT_03003 at 27.985 kb on - strand, within H281DRAFT_03003 at 27.985 kb on - strand, within H281DRAFT_03003 at 28.138 kb on - strand, within H281DRAFT_03003 at 28.302 kb on - strand, within H281DRAFT_03003 at 28.322 kb on + strand, within H281DRAFT_03003 at 28.323 kb on - strand, within H281DRAFT_03003 at 28.362 kb on + strand, within H281DRAFT_03003 at 28.371 kb on + strand, within H281DRAFT_03003 at 28.371 kb on + strand, within H281DRAFT_03003 at 28.372 kb on - strand, within H281DRAFT_03003 at 28.372 kb on - strand, within H281DRAFT_03003 at 28.395 kb on + strand, within H281DRAFT_03003 at 28.414 kb on + strand, within H281DRAFT_03003 at 28.415 kb on - strand, within H281DRAFT_03003 at 28.517 kb on + strand, within H281DRAFT_03003 at 28.762 kb on + strand at 28.762 kb on + strand at 28.827 kb on + strand at 28.828 kb on - strand at 28.828 kb on - strand at 28.869 kb on - strand at 28.869 kb on - strand at 28.870 kb on + strand at 28.871 kb on - strand at 28.871 kb on - strand at 28.887 kb on + strand at 29.078 kb on + strand at 29.079 kb on - strand at 29.126 kb on + strand at 29.179 kb on + strand at 29.179 kb on + strand at 29.211 kb on - strand at 29.334 kb on - strand, within H281DRAFT_03004 at 29.377 kb on + strand, within H281DRAFT_03004 at 29.432 kb on - strand, within H281DRAFT_03004 at 29.502 kb on + strand, within H281DRAFT_03004 at 29.502 kb on + strand, within H281DRAFT_03004 at 29.502 kb on + strand, within H281DRAFT_03004 at 29.503 kb on - strand, within H281DRAFT_03004 at 29.503 kb on - strand, within H281DRAFT_03004 at 29.503 kb on - strand, within H281DRAFT_03004 at 29.504 kb on + strand, within H281DRAFT_03004 at 29.505 kb on - strand, within H281DRAFT_03004 at 29.633 kb on + strand, within H281DRAFT_03004 at 29.633 kb on + strand, within H281DRAFT_03004 at 29.634 kb on - strand, within H281DRAFT_03004 at 29.660 kb on + strand, within H281DRAFT_03004 at 29.660 kb on + strand, within H281DRAFT_03004 at 29.661 kb on - strand, within H281DRAFT_03004 at 29.661 kb on - strand, within H281DRAFT_03004
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 26,514 + H281DRAFT_03001 0.78 +0.4 26,654 + H281DRAFT_03001 0.82 +0.1 26,654 + H281DRAFT_03001 0.82 -0.1 26,675 + H281DRAFT_03001 0.83 -0.4 26,676 - H281DRAFT_03001 0.83 -1.4 26,676 - H281DRAFT_03001 0.83 +0.2 26,820 + H281DRAFT_03001 0.88 -0.6 26,845 + H281DRAFT_03001 0.89 +0.0 26,846 - H281DRAFT_03001 0.89 -0.5 26,846 - H281DRAFT_03001 0.89 +0.4 27,026 + +0.4 27,027 - +0.1 27,027 - +0.6 27,106 + -0.3 27,107 - -0.5 27,266 + H281DRAFT_03002 0.29 +0.4 27,296 + H281DRAFT_03002 0.52 -0.2 27,296 + H281DRAFT_03002 0.52 +0.4 27,296 + H281DRAFT_03002 0.52 -0.1 27,297 - H281DRAFT_03002 0.53 +0.0 27,369 + -0.1 27,370 - +0.1 27,537 + H281DRAFT_03003 0.12 -0.1 27,640 - H281DRAFT_03003 0.19 +0.2 27,669 + H281DRAFT_03003 0.21 -0.6 27,670 - H281DRAFT_03003 0.22 +0.3 27,690 + H281DRAFT_03003 0.23 +0.6 27,690 + H281DRAFT_03003 0.23 +0.3 27,747 + H281DRAFT_03003 0.27 -0.1 27,747 + H281DRAFT_03003 0.27 +0.4 27,748 - H281DRAFT_03003 0.27 -0.4 27,748 - H281DRAFT_03003 0.27 +0.0 27,780 + H281DRAFT_03003 0.29 +1.0 27,780 + H281DRAFT_03003 0.29 -0.5 27,780 + H281DRAFT_03003 0.29 +0.3 27,781 - H281DRAFT_03003 0.29 +0.1 27,985 - H281DRAFT_03003 0.44 +1.0 27,985 - H281DRAFT_03003 0.44 +0.2 28,138 - H281DRAFT_03003 0.55 -0.5 28,302 - H281DRAFT_03003 0.67 +0.1 28,322 + H281DRAFT_03003 0.68 +1.4 28,323 - H281DRAFT_03003 0.68 +0.3 28,362 + H281DRAFT_03003 0.71 +0.9 28,371 + H281DRAFT_03003 0.71 +0.7 28,371 + H281DRAFT_03003 0.71 +0.0 28,372 - H281DRAFT_03003 0.72 +0.5 28,372 - H281DRAFT_03003 0.72 +0.3 28,395 + H281DRAFT_03003 0.73 +0.8 28,414 + H281DRAFT_03003 0.75 -0.3 28,415 - H281DRAFT_03003 0.75 -0.1 28,517 + H281DRAFT_03003 0.82 +0.1 28,762 + +0.2 28,762 + -0.0 28,827 + -0.2 28,828 - +0.1 28,828 - -0.4 28,869 - +0.3 28,869 - -0.6 28,870 + -0.0 28,871 - -0.2 28,871 - -0.1 28,887 + -0.5 29,078 + -0.7 29,079 - -0.3 29,126 + -0.1 29,179 + -0.4 29,179 + +0.2 29,211 - -0.1 29,334 - H281DRAFT_03004 0.15 -0.4 29,377 + H281DRAFT_03004 0.18 +0.1 29,432 - H281DRAFT_03004 0.22 +0.0 29,502 + H281DRAFT_03004 0.27 -0.7 29,502 + H281DRAFT_03004 0.27 +0.0 29,502 + H281DRAFT_03004 0.27 -0.6 29,503 - H281DRAFT_03004 0.27 +0.7 29,503 - H281DRAFT_03004 0.27 +0.1 29,503 - H281DRAFT_03004 0.27 -0.2 29,504 + H281DRAFT_03004 0.27 +0.0 29,505 - H281DRAFT_03004 0.27 -0.1 29,633 + H281DRAFT_03004 0.37 -1.6 29,633 + H281DRAFT_03004 0.37 +0.1 29,634 - H281DRAFT_03004 0.37 -0.3 29,660 + H281DRAFT_03004 0.39 -0.2 29,660 + H281DRAFT_03004 0.39 -0.1 29,661 - H281DRAFT_03004 0.39 +0.3 29,661 - H281DRAFT_03004 0.39 +0.0
Or see this region's nucleotide sequence