Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00469 and H281DRAFT_00470 are separated by 771 nucleotides H281DRAFT_00470 and H281DRAFT_00471 are separated by 96 nucleotides
H281DRAFT_00469: H281DRAFT_00469 - phasin family protein, at 527,969 to 528,541
_00469
H281DRAFT_00470: H281DRAFT_00470 - murein-DD-endopeptidase. Serine peptidase. MEROPS family S11, at 529,313 to 530,494
_00470
H281DRAFT_00471: H281DRAFT_00471 - transcriptional regulator, IclR family, at 530,591 to 531,403
_00471
Position (kb) 529
530
531 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 528.546 kb on + strand at 528.546 kb on + strand at 528.654 kb on + strand at 528.813 kb on - strand at 528.842 kb on + strand at 528.842 kb on + strand at 528.892 kb on + strand at 528.916 kb on + strand at 528.923 kb on + strand at 528.923 kb on + strand at 528.992 kb on - strand at 528.992 kb on - strand at 529.186 kb on + strand at 529.236 kb on + strand at 529.272 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.304 kb on - strand at 529.304 kb on - strand at 529.610 kb on + strand, within H281DRAFT_00470 at 529.610 kb on + strand, within H281DRAFT_00470 at 529.610 kb on + strand, within H281DRAFT_00470 at 529.610 kb on + strand, within H281DRAFT_00470 at 529.611 kb on - strand, within H281DRAFT_00470 at 529.611 kb on - strand, within H281DRAFT_00470 at 529.612 kb on + strand, within H281DRAFT_00470 at 529.612 kb on + strand, within H281DRAFT_00470 at 529.612 kb on + strand, within H281DRAFT_00470 at 529.613 kb on - strand, within H281DRAFT_00470 at 529.655 kb on + strand, within H281DRAFT_00470 at 529.655 kb on + strand, within H281DRAFT_00470 at 529.656 kb on - strand, within H281DRAFT_00470 at 529.740 kb on - strand, within H281DRAFT_00470 at 530.165 kb on + strand, within H281DRAFT_00470 at 530.165 kb on + strand, within H281DRAFT_00470 at 530.166 kb on - strand, within H281DRAFT_00470 at 530.207 kb on + strand, within H281DRAFT_00470 at 530.207 kb on + strand at 530.207 kb on + strand, within H281DRAFT_00470 at 530.208 kb on - strand, within H281DRAFT_00470 at 530.217 kb on - strand, within H281DRAFT_00470 at 530.240 kb on + strand, within H281DRAFT_00470 at 530.251 kb on + strand, within H281DRAFT_00470 at 530.251 kb on + strand, within H281DRAFT_00470 at 530.393 kb on + strand at 530.618 kb on - strand at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.765 kb on + strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.768 kb on - strand, within H281DRAFT_00471 at 531.320 kb on - strand, within H281DRAFT_00471 at 531.446 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 528,546 + -0.2 528,546 + +0.2 528,654 + -0.4 528,813 - -0.2 528,842 + -0.8 528,842 + -2.2 528,892 + +0.0 528,916 + +0.2 528,923 + +0.0 528,923 + +1.2 528,992 - +0.5 528,992 - +0.1 529,186 + +0.1 529,236 + -0.7 529,272 + +1.3 529,303 + -0.5 529,303 + -0.5 529,303 + +0.6 529,303 + +0.3 529,303 + -0.1 529,304 - +0.1 529,304 - +0.2 529,610 + H281DRAFT_00470 0.25 +0.2 529,610 + H281DRAFT_00470 0.25 -0.9 529,610 + H281DRAFT_00470 0.25 +0.7 529,610 + H281DRAFT_00470 0.25 +0.1 529,611 - H281DRAFT_00470 0.25 -0.9 529,611 - H281DRAFT_00470 0.25 +0.5 529,612 + H281DRAFT_00470 0.25 +0.2 529,612 + H281DRAFT_00470 0.25 -0.5 529,612 + H281DRAFT_00470 0.25 -1.3 529,613 - H281DRAFT_00470 0.25 -0.3 529,655 + H281DRAFT_00470 0.29 -0.4 529,655 + H281DRAFT_00470 0.29 -0.8 529,656 - H281DRAFT_00470 0.29 -0.3 529,740 - H281DRAFT_00470 0.36 +0.5 530,165 + H281DRAFT_00470 0.72 -0.1 530,165 + H281DRAFT_00470 0.72 +0.7 530,166 - H281DRAFT_00470 0.72 +0.2 530,207 + H281DRAFT_00470 0.76 -1.7 530,207 + -0.3 530,207 + H281DRAFT_00470 0.76 -1.4 530,208 - H281DRAFT_00470 0.76 -0.2 530,217 - H281DRAFT_00470 0.76 +0.5 530,240 + H281DRAFT_00470 0.78 -0.6 530,251 + H281DRAFT_00470 0.79 -1.4 530,251 + H281DRAFT_00470 0.79 -1.8 530,393 + -0.5 530,618 - -0.3 530,764 - H281DRAFT_00471 0.21 -4.8 530,764 - H281DRAFT_00471 0.21 -2.0 530,764 - H281DRAFT_00471 0.21 -3.8 530,764 - H281DRAFT_00471 0.21 -5.3 530,765 + H281DRAFT_00471 0.21 -3.2 530,766 - H281DRAFT_00471 0.22 -3.1 530,766 - H281DRAFT_00471 0.22 -3.8 530,766 - H281DRAFT_00471 0.22 -1.9 530,768 - H281DRAFT_00471 0.22 -2.1 531,320 - H281DRAFT_00471 0.90 -5.2 531,446 - +1.9
Or see this region's nucleotide sequence