Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00464

Experiment: 3-Hydroxypropionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00463 and H281DRAFT_00464 are separated by 354 nucleotidesH281DRAFT_00464 and H281DRAFT_00465 overlap by 4 nucleotides H281DRAFT_00463: H281DRAFT_00463 - methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (NADP+), at 516,525 to 517,385 _00463 H281DRAFT_00464: H281DRAFT_00464 - two component transcriptional regulator, LuxR family, at 517,740 to 518,387 _00464 H281DRAFT_00465: H281DRAFT_00465 - PAS/PAC sensor signal transduction histidine kinase /multi-sensor signal transduction histidine kinase, at 518,384 to 520,909 _00465 Position (kb) 517 518 519Strain fitness (log2 ratio) -2 -1 0 1at 517.499 kb on - strandat 517.524 kb on - strandat 517.525 kb on + strandat 517.526 kb on - strandat 517.623 kb on + strandat 517.741 kb on + strandat 519.077 kb on - strand, within H281DRAFT_00465

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Per-strain Table

Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C)
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517,499 - +0.3
517,524 - +0.7
517,525 + -0.3
517,526 - -0.8
517,623 + +0.1
517,741 + -1.3
519,077 - H281DRAFT_00465 0.27 -2.0

Or see this region's nucleotide sequence