Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21880 and BWI76_RS21885 are separated by 10 nucleotides BWI76_RS21885 and BWI76_RS21890 are separated by 12 nucleotides
BWI76_RS21880: BWI76_RS21880 - agmatinase, at 4,572,269 to 4,573,219
_RS21880
BWI76_RS21885: BWI76_RS21885 - AP endonuclease, family 2, at 4,573,230 to 4,574,078
_RS21885
BWI76_RS21890: BWI76_RS21890 - oxidoreductase, at 4,574,091 to 4,575,167
_RS21890
Position (kb)
4573
4574
4575 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4572.552 kb on + strand, within BWI76_RS21880 at 4572.562 kb on + strand at 4572.703 kb on + strand, within BWI76_RS21880 at 4572.841 kb on + strand, within BWI76_RS21880 at 4572.841 kb on + strand, within BWI76_RS21880 at 4572.849 kb on - strand, within BWI76_RS21880 at 4572.849 kb on - strand, within BWI76_RS21880 at 4572.892 kb on + strand, within BWI76_RS21880 at 4572.900 kb on - strand, within BWI76_RS21880 at 4572.900 kb on - strand at 4572.955 kb on + strand, within BWI76_RS21880 at 4573.006 kb on + strand, within BWI76_RS21880 at 4573.261 kb on - strand at 4573.264 kb on + strand at 4573.431 kb on - strand, within BWI76_RS21885 at 4573.513 kb on + strand, within BWI76_RS21885 at 4573.615 kb on + strand, within BWI76_RS21885 at 4573.791 kb on + strand, within BWI76_RS21885 at 4573.799 kb on - strand, within BWI76_RS21885 at 4573.799 kb on - strand, within BWI76_RS21885 at 4573.890 kb on - strand, within BWI76_RS21885 at 4574.040 kb on - strand at 4574.323 kb on + strand, within BWI76_RS21890 at 4574.441 kb on + strand, within BWI76_RS21890 at 4574.449 kb on - strand, within BWI76_RS21890 at 4574.524 kb on + strand, within BWI76_RS21890 at 4574.655 kb on + strand, within BWI76_RS21890 at 4574.716 kb on - strand, within BWI76_RS21890 at 4575.036 kb on + strand, within BWI76_RS21890 at 4575.044 kb on - strand, within BWI76_RS21890 at 4575.068 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 4,572,552 + BWI76_RS21880 0.30 -0.9 4,572,562 + +0.5 4,572,703 + BWI76_RS21880 0.46 +0.2 4,572,841 + BWI76_RS21880 0.60 +0.1 4,572,841 + BWI76_RS21880 0.60 +0.2 4,572,849 - BWI76_RS21880 0.61 -0.1 4,572,849 - BWI76_RS21880 0.61 +0.8 4,572,892 + BWI76_RS21880 0.66 +0.2 4,572,900 - BWI76_RS21880 0.66 +0.2 4,572,900 - -0.7 4,572,955 + BWI76_RS21880 0.72 +0.0 4,573,006 + BWI76_RS21880 0.77 +0.8 4,573,261 - -0.2 4,573,264 + +0.2 4,573,431 - BWI76_RS21885 0.24 +0.8 4,573,513 + BWI76_RS21885 0.33 -0.5 4,573,615 + BWI76_RS21885 0.45 -2.2 4,573,791 + BWI76_RS21885 0.66 -0.1 4,573,799 - BWI76_RS21885 0.67 -0.4 4,573,799 - BWI76_RS21885 0.67 -0.1 4,573,890 - BWI76_RS21885 0.78 +0.1 4,574,040 - -0.3 4,574,323 + BWI76_RS21890 0.22 +0.9 4,574,441 + BWI76_RS21890 0.32 +1.8 4,574,449 - BWI76_RS21890 0.33 -0.3 4,574,524 + BWI76_RS21890 0.40 +0.3 4,574,655 + BWI76_RS21890 0.52 +0.6 4,574,716 - BWI76_RS21890 0.58 +0.2 4,575,036 + BWI76_RS21890 0.88 -1.7 4,575,044 - BWI76_RS21890 0.88 +0.4 4,575,068 + -0.1
Or see this region's nucleotide sequence