Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11485

Experiment: L-Tryptophan (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11480 and BWI76_RS11485 are separated by 130 nucleotidesBWI76_RS11485 and BWI76_RS11490 are separated by 426 nucleotides BWI76_RS11480: BWI76_RS11480 - hypothetical protein, at 2,415,938 to 2,417,221 _RS11480 BWI76_RS11485: BWI76_RS11485 - serine protein kinase PrkA, at 2,417,352 to 2,419,286 _RS11485 BWI76_RS11490: BWI76_RS11490 - MltA-interacting protein MipA, at 2,419,713 to 2,420,459 _RS11490 Position (kb) 2417 2418 2419 2420Strain fitness (log2 ratio) -1 0 1 2at 2416.588 kb on + strand, within BWI76_RS11480at 2416.632 kb on + strand, within BWI76_RS11480at 2416.762 kb on - strand, within BWI76_RS11480at 2416.907 kb on + strand, within BWI76_RS11480at 2416.915 kb on - strand, within BWI76_RS11480at 2417.140 kb on + strandat 2417.219 kb on + strandat 2417.227 kb on - strandat 2417.235 kb on - strandat 2417.336 kb on + strandat 2417.409 kb on + strandat 2417.410 kb on - strandat 2417.789 kb on + strand, within BWI76_RS11485at 2417.790 kb on + strand, within BWI76_RS11485at 2417.821 kb on + strand, within BWI76_RS11485at 2418.170 kb on + strand, within BWI76_RS11485at 2418.321 kb on + strand, within BWI76_RS11485at 2418.325 kb on + strand, within BWI76_RS11485at 2418.358 kb on - strand, within BWI76_RS11485at 2418.905 kb on + strand, within BWI76_RS11485at 2418.905 kb on + strand, within BWI76_RS11485at 2418.921 kb on - strand, within BWI76_RS11485at 2419.179 kb on + strandat 2419.316 kb on + strandat 2419.324 kb on - strandat 2419.375 kb on + strandat 2419.400 kb on - strandat 2419.400 kb on - strandat 2419.400 kb on - strandat 2419.582 kb on + strandat 2419.667 kb on + strandat 2419.709 kb on - strandat 2419.760 kb on + strandat 2419.792 kb on + strand, within BWI76_RS11490at 2420.053 kb on + strand, within BWI76_RS11490at 2420.199 kb on + strand, within BWI76_RS11490at 2420.228 kb on + strand, within BWI76_RS11490

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Tryptophan (N)
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2,416,588 + BWI76_RS11480 0.51 +1.6
2,416,632 + BWI76_RS11480 0.54 +1.5
2,416,762 - BWI76_RS11480 0.64 +1.3
2,416,907 + BWI76_RS11480 0.75 +1.6
2,416,915 - BWI76_RS11480 0.76 +0.9
2,417,140 + +1.0
2,417,219 + +1.8
2,417,227 - +1.6
2,417,235 - +1.4
2,417,336 + +1.1
2,417,409 + +0.9
2,417,410 - +1.7
2,417,789 + BWI76_RS11485 0.23 +1.0
2,417,790 + BWI76_RS11485 0.23 +2.5
2,417,821 + BWI76_RS11485 0.24 -0.1
2,418,170 + BWI76_RS11485 0.42 +1.6
2,418,321 + BWI76_RS11485 0.50 +0.8
2,418,325 + BWI76_RS11485 0.50 +1.2
2,418,358 - BWI76_RS11485 0.52 -0.7
2,418,905 + BWI76_RS11485 0.80 +1.1
2,418,905 + BWI76_RS11485 0.80 +2.0
2,418,921 - BWI76_RS11485 0.81 +1.2
2,419,179 + +1.0
2,419,316 + +1.6
2,419,324 - +0.5
2,419,375 + +1.8
2,419,400 - +0.6
2,419,400 - +1.0
2,419,400 - -1.2
2,419,582 + +1.1
2,419,667 + +0.7
2,419,709 - -0.5
2,419,760 + +0.2
2,419,792 + BWI76_RS11490 0.11 +1.4
2,420,053 + BWI76_RS11490 0.46 +0.3
2,420,199 + BWI76_RS11490 0.65 -0.9
2,420,228 + BWI76_RS11490 0.69 -0.0

Or see this region's nucleotide sequence