Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11480 and BWI76_RS11485 are separated by 130 nucleotides BWI76_RS11485 and BWI76_RS11490 are separated by 426 nucleotides
BWI76_RS11480: BWI76_RS11480 - hypothetical protein, at 2,415,938 to 2,417,221
_RS11480
BWI76_RS11485: BWI76_RS11485 - serine protein kinase PrkA, at 2,417,352 to 2,419,286
_RS11485
BWI76_RS11490: BWI76_RS11490 - MltA-interacting protein MipA, at 2,419,713 to 2,420,459
_RS11490
Position (kb)
2417
2418
2419
2420 Strain fitness (log2 ratio)
-1
0
1
2 at 2416.588 kb on + strand, within BWI76_RS11480 at 2416.632 kb on + strand, within BWI76_RS11480 at 2416.762 kb on - strand, within BWI76_RS11480 at 2416.907 kb on + strand, within BWI76_RS11480 at 2416.915 kb on - strand, within BWI76_RS11480 at 2417.140 kb on + strand at 2417.219 kb on + strand at 2417.227 kb on - strand at 2417.235 kb on - strand at 2417.336 kb on + strand at 2417.409 kb on + strand at 2417.410 kb on - strand at 2417.789 kb on + strand, within BWI76_RS11485 at 2417.790 kb on + strand, within BWI76_RS11485 at 2417.821 kb on + strand, within BWI76_RS11485 at 2418.170 kb on + strand, within BWI76_RS11485 at 2418.321 kb on + strand, within BWI76_RS11485 at 2418.325 kb on + strand, within BWI76_RS11485 at 2418.358 kb on - strand, within BWI76_RS11485 at 2418.905 kb on + strand, within BWI76_RS11485 at 2418.905 kb on + strand, within BWI76_RS11485 at 2418.921 kb on - strand, within BWI76_RS11485 at 2419.179 kb on + strand at 2419.316 kb on + strand at 2419.324 kb on - strand at 2419.375 kb on + strand at 2419.400 kb on - strand at 2419.400 kb on - strand at 2419.400 kb on - strand at 2419.582 kb on + strand at 2419.667 kb on + strand at 2419.709 kb on - strand at 2419.760 kb on + strand at 2419.792 kb on + strand, within BWI76_RS11490 at 2420.053 kb on + strand, within BWI76_RS11490 at 2420.199 kb on + strand, within BWI76_RS11490 at 2420.228 kb on + strand, within BWI76_RS11490
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 2,416,588 + BWI76_RS11480 0.51 +1.6 2,416,632 + BWI76_RS11480 0.54 +1.5 2,416,762 - BWI76_RS11480 0.64 +1.3 2,416,907 + BWI76_RS11480 0.75 +1.6 2,416,915 - BWI76_RS11480 0.76 +0.9 2,417,140 + +1.0 2,417,219 + +1.8 2,417,227 - +1.6 2,417,235 - +1.4 2,417,336 + +1.1 2,417,409 + +0.9 2,417,410 - +1.7 2,417,789 + BWI76_RS11485 0.23 +1.0 2,417,790 + BWI76_RS11485 0.23 +2.5 2,417,821 + BWI76_RS11485 0.24 -0.1 2,418,170 + BWI76_RS11485 0.42 +1.6 2,418,321 + BWI76_RS11485 0.50 +0.8 2,418,325 + BWI76_RS11485 0.50 +1.2 2,418,358 - BWI76_RS11485 0.52 -0.7 2,418,905 + BWI76_RS11485 0.80 +1.1 2,418,905 + BWI76_RS11485 0.80 +2.0 2,418,921 - BWI76_RS11485 0.81 +1.2 2,419,179 + +1.0 2,419,316 + +1.6 2,419,324 - +0.5 2,419,375 + +1.8 2,419,400 - +0.6 2,419,400 - +1.0 2,419,400 - -1.2 2,419,582 + +1.1 2,419,667 + +0.7 2,419,709 - -0.5 2,419,760 + +0.2 2,419,792 + BWI76_RS11490 0.11 +1.4 2,420,053 + BWI76_RS11490 0.46 +0.3 2,420,199 + BWI76_RS11490 0.65 -0.9 2,420,228 + BWI76_RS11490 0.69 -0.0
Or see this region's nucleotide sequence