Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11475 and BWI76_RS11480 are separated by 47 nucleotides BWI76_RS11480 and BWI76_RS11485 are separated by 130 nucleotides
BWI76_RS11475: BWI76_RS11475 - glycosyl transferase, at 2,414,733 to 2,415,890
_RS11475
BWI76_RS11480: BWI76_RS11480 - hypothetical protein, at 2,415,938 to 2,417,221
_RS11480
BWI76_RS11485: BWI76_RS11485 - serine protein kinase PrkA, at 2,417,352 to 2,419,286
_RS11485
Position (kb)
2415
2416
2417
2418 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2414.964 kb on - strand, within BWI76_RS11475 at 2414.966 kb on + strand, within BWI76_RS11475 at 2414.966 kb on + strand, within BWI76_RS11475 at 2414.966 kb on + strand, within BWI76_RS11475 at 2414.966 kb on + strand, within BWI76_RS11475 at 2414.966 kb on + strand, within BWI76_RS11475 at 2414.966 kb on + strand, within BWI76_RS11475 at 2414.974 kb on - strand, within BWI76_RS11475 at 2414.978 kb on + strand, within BWI76_RS11475 at 2414.988 kb on + strand, within BWI76_RS11475 at 2414.991 kb on - strand, within BWI76_RS11475 at 2415.015 kb on + strand, within BWI76_RS11475 at 2415.025 kb on + strand, within BWI76_RS11475 at 2415.080 kb on - strand, within BWI76_RS11475 at 2415.373 kb on + strand, within BWI76_RS11475 at 2415.373 kb on + strand, within BWI76_RS11475 at 2415.373 kb on + strand, within BWI76_RS11475 at 2415.381 kb on - strand, within BWI76_RS11475 at 2415.381 kb on - strand, within BWI76_RS11475 at 2415.381 kb on - strand, within BWI76_RS11475 at 2415.396 kb on - strand, within BWI76_RS11475 at 2415.411 kb on - strand, within BWI76_RS11475 at 2415.439 kb on + strand, within BWI76_RS11475 at 2415.440 kb on - strand, within BWI76_RS11475 at 2415.471 kb on + strand, within BWI76_RS11475 at 2415.594 kb on + strand, within BWI76_RS11475 at 2415.728 kb on + strand, within BWI76_RS11475 at 2415.768 kb on + strand, within BWI76_RS11475 at 2415.773 kb on + strand, within BWI76_RS11475 at 2415.781 kb on - strand at 2415.859 kb on - strand at 2415.936 kb on + strand at 2415.957 kb on - strand at 2416.087 kb on + strand, within BWI76_RS11480 at 2416.122 kb on + strand, within BWI76_RS11480 at 2416.144 kb on + strand, within BWI76_RS11480 at 2416.164 kb on - strand, within BWI76_RS11480 at 2416.185 kb on + strand, within BWI76_RS11480 at 2416.255 kb on + strand, within BWI76_RS11480 at 2416.323 kb on + strand, within BWI76_RS11480 at 2416.331 kb on - strand, within BWI76_RS11480 at 2416.331 kb on - strand, within BWI76_RS11480 at 2416.588 kb on + strand, within BWI76_RS11480 at 2416.632 kb on + strand, within BWI76_RS11480 at 2416.762 kb on - strand, within BWI76_RS11480 at 2416.907 kb on + strand, within BWI76_RS11480 at 2416.915 kb on - strand, within BWI76_RS11480 at 2417.140 kb on + strand at 2417.219 kb on + strand at 2417.227 kb on - strand at 2417.235 kb on - strand at 2417.336 kb on + strand at 2417.409 kb on + strand at 2417.410 kb on - strand at 2417.789 kb on + strand, within BWI76_RS11485 at 2417.790 kb on + strand, within BWI76_RS11485 at 2417.821 kb on + strand, within BWI76_RS11485 at 2418.170 kb on + strand, within BWI76_RS11485
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 2,414,964 - BWI76_RS11475 0.20 +0.9 2,414,966 + BWI76_RS11475 0.20 +0.7 2,414,966 + BWI76_RS11475 0.20 -0.4 2,414,966 + BWI76_RS11475 0.20 -1.0 2,414,966 + BWI76_RS11475 0.20 -2.0 2,414,966 + BWI76_RS11475 0.20 +0.8 2,414,966 + BWI76_RS11475 0.20 -0.6 2,414,974 - BWI76_RS11475 0.21 -0.9 2,414,978 + BWI76_RS11475 0.21 -0.4 2,414,988 + BWI76_RS11475 0.22 -0.1 2,414,991 - BWI76_RS11475 0.22 +0.4 2,415,015 + BWI76_RS11475 0.24 +0.1 2,415,025 + BWI76_RS11475 0.25 +0.3 2,415,080 - BWI76_RS11475 0.30 +0.9 2,415,373 + BWI76_RS11475 0.55 -0.2 2,415,373 + BWI76_RS11475 0.55 -0.2 2,415,373 + BWI76_RS11475 0.55 +1.5 2,415,381 - BWI76_RS11475 0.56 -0.4 2,415,381 - BWI76_RS11475 0.56 +0.5 2,415,381 - BWI76_RS11475 0.56 -1.1 2,415,396 - BWI76_RS11475 0.57 +0.9 2,415,411 - BWI76_RS11475 0.59 -0.4 2,415,439 + BWI76_RS11475 0.61 -2.6 2,415,440 - BWI76_RS11475 0.61 +0.9 2,415,471 + BWI76_RS11475 0.64 +1.5 2,415,594 + BWI76_RS11475 0.74 +0.2 2,415,728 + BWI76_RS11475 0.86 -0.2 2,415,768 + BWI76_RS11475 0.89 +0.0 2,415,773 + BWI76_RS11475 0.90 +0.7 2,415,781 - -0.8 2,415,859 - -0.9 2,415,936 + -0.7 2,415,957 - +0.7 2,416,087 + BWI76_RS11480 0.12 +0.4 2,416,122 + BWI76_RS11480 0.14 +1.8 2,416,144 + BWI76_RS11480 0.16 +0.2 2,416,164 - BWI76_RS11480 0.18 +1.1 2,416,185 + BWI76_RS11480 0.19 +2.1 2,416,255 + BWI76_RS11480 0.25 +1.5 2,416,323 + BWI76_RS11480 0.30 +1.3 2,416,331 - BWI76_RS11480 0.31 +1.6 2,416,331 - BWI76_RS11480 0.31 +1.6 2,416,588 + BWI76_RS11480 0.51 +1.6 2,416,632 + BWI76_RS11480 0.54 +1.5 2,416,762 - BWI76_RS11480 0.64 +1.3 2,416,907 + BWI76_RS11480 0.75 +1.6 2,416,915 - BWI76_RS11480 0.76 +0.9 2,417,140 + +1.0 2,417,219 + +1.8 2,417,227 - +1.6 2,417,235 - +1.4 2,417,336 + +1.1 2,417,409 + +0.9 2,417,410 - +1.7 2,417,789 + BWI76_RS11485 0.23 +1.0 2,417,790 + BWI76_RS11485 0.23 +2.5 2,417,821 + BWI76_RS11485 0.24 -0.1 2,418,170 + BWI76_RS11485 0.42 +1.6
Or see this region's nucleotide sequence