Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS14590

Experiment: reconstituted MRS with WakoIMO-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with WakoIMO-prebiotic 0.5 %w/v
1,044,257	+				+0.4
1,044,308	-				+0.8
1,044,327	+				+1.2
1,044,327	+				+0.5
1,044,327	+				-0.3
1,044,335	-				+0.6
1,044,370	-				+0.2
1,044,464	+				+0.4
1,044,471	+		BBR_RS20835	0.10	+0.5
1,044,501	-		BBR_RS20835	0.17	+0.2
1,044,510	+		BBR_RS20835	0.19	+0.2
1,044,529	+		BBR_RS20835	0.23	+0.1
1,044,529	+		BBR_RS20835	0.23	-0.3
1,044,535	-		BBR_RS20835	0.24	+0.4
1,044,631	+		BBR_RS20835	0.45	+0.1
1,044,631	+		BBR_RS20835	0.45	+1.1
1,044,758	+		BBR_RS20835	0.72	-0.5
1,044,815	+		BBR_RS20835	0.85	+0.3
1,044,815	+		BBR_RS20835	0.85	-0.0
1,044,874	+				+0.4
1,044,874	+				+0.6
1,044,874	+				-0.3
1,044,874	+				+0.0
1,044,874	-				-0.1
1,044,888	-				+0.1
1,044,905	+				+0.6
1,044,905	+				+0.3
1,045,003	-		BBR_RS14585	0.48	+0.4
1,045,025	-		BBR_RS14585	0.58	-0.7
1,045,061	-		BBR_RS14585	0.73	+1.2
1,045,175	-				+1.5
1,045,210	+				+0.3
1,045,289	+				+0.0
1,045,354	-		BBR_RS14590	0.15	+0.3
1,045,364	-		BBR_RS14590	0.16	-0.0
1,045,386	+		BBR_RS14590	0.19	+0.7
1,045,394	-		BBR_RS14590	0.20	-0.1
1,045,498	-		BBR_RS14590	0.32	+0.3
1,045,562	+		BBR_RS14590	0.39	+0.6
1,045,562	+		BBR_RS14590	0.39	+0.0
1,045,685	+		BBR_RS14590	0.53	-0.1
1,045,693	-		BBR_RS14590	0.54	-0.1
1,045,693	-		BBR_RS14590	0.54	-0.8
1,045,695	+		BBR_RS14590	0.54	-0.5
1,045,695	+		BBR_RS14590	0.54	+0.4
1,045,695	+		BBR_RS14590	0.54	-0.2
1,045,703	-		BBR_RS14590	0.55	-0.5
1,045,703	-		BBR_RS14590	0.55	+0.3
1,045,712	+		BBR_RS14590	0.56	-0.3
1,045,740	-		BBR_RS14590	0.59	+0.2
1,045,740	-		BBR_RS14590	0.59	+0.2
1,045,745	-		BBR_RS14590	0.60	-0.8
1,045,756	-		BBR_RS14590	0.61	-0.1
1,045,803	+		BBR_RS14590	0.67	+0.5
1,045,811	-		BBR_RS14590	0.67	+0.7
1,045,813	+		BBR_RS14590	0.68	+1.0
1,045,837	+		BBR_RS14590	0.70	+0.7
1,045,850	-		BBR_RS14590	0.72	-0.7
1,045,906	+		BBR_RS14590	0.78	+1.0
1,045,919	+		BBR_RS14590	0.80	+1.0
1,045,931	+		BBR_RS14590	0.81	+0.6
1,045,931	+		BBR_RS14590	0.81	+0.2
1,045,944	-		BBR_RS14590	0.83	+0.4
1,046,056	-				+0.0
1,046,079	-				-0.0
1,046,145	+				-1.5
1,046,153	-				-0.3
1,046,165	+				+0.2
1,046,286	-				+0.3
1,046,343	-				+0.0
1,046,384	-				+0.3
1,046,410	-				-0.4
1,046,466	+				+0.0
1,046,474	-				-0.5
1,046,559	+				-0.5
1,046,560	+				+0.1
1,046,569	-				-0.6
1,046,616	+				-0.0
1,046,640	+				+0.1
1,046,710	+				+0.0
1,046,744	+				-0.1
1,046,750	-				+0.8
1,046,798	+				-0.2
1,046,798	+				-0.1
1,046,806	-				+0.3
1,046,835	+				+0.2
1,046,843	-		BBR_RS14595	0.10	+0.1
1,046,882	+		BBR_RS14595	0.13	-0.1
1,046,889	-		BBR_RS14595	0.14	+0.6
1,046,889	-		BBR_RS14595	0.14	+0.2
1,046,889	-		BBR_RS14595	0.14	+0.0
1,046,896	+		BBR_RS14595	0.14	-0.1
1,046,899	-		BBR_RS14595	0.15	-0.4
1,046,901	+		BBR_RS14595	0.15	+0.2
1,046,901	+		BBR_RS14595	0.15	+0.5
1,046,909	-		BBR_RS14595	0.15	+0.7
1,046,909	-		BBR_RS14595	0.15	-0.2
1,046,946	-		BBR_RS14595	0.18	+0.1
1,047,006	+		BBR_RS14595	0.23	-0.5
1,047,064	-		BBR_RS14595	0.27	+0.3
1,047,068	+		BBR_RS14595	0.27	+0.8
1,047,073	+		BBR_RS14595	0.28	+0.6
1,047,083	-		BBR_RS14595	0.28	-1.0
1,047,083	-		BBR_RS14595	0.28	-1.2