Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3659

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
60,250	-				-0.0
60,300	-				+0.2
60,308	+				+0.2
60,311	-				-2.3
60,384	+				-0.1
60,392	-				-0.1
60,392	-				-3.6
60,409	+				-0.9
60,432	+				+0.3
60,449	+				-0.1
60,465	-				+0.4
60,502	+				-0.5
60,566	+				-0.6
60,573	-				-0.4
60,573	-				-0.4
60,574	-				-0.8
60,673	+				-0.3
60,734	-				-0.5
60,738	+				+1.1
60,921	+		Dshi_3658	0.40	+0.1
60,979	+		Dshi_3658	0.68	-0.3
61,006	-		Dshi_3658	0.81	-0.4
61,083	-				+0.1
61,120	+				-0.5
61,178	+				+0.6
61,184	+				-0.7
61,189	+				-0.5
61,238	-				-0.7
61,303	+		Dshi_3659	0.19	+0.5
61,326	-		Dshi_3659	0.27	-0.2
61,377	+		Dshi_3659	0.44	-0.0
61,385	-		Dshi_3659	0.46	+0.3
61,429	+		Dshi_3659	0.61	-0.3
61,474	+		Dshi_3659	0.76	-1.2
61,474	+		Dshi_3659	0.76	+0.1
61,475	+		Dshi_3659	0.76	+1.2
61,482	-		Dshi_3659	0.78	+0.6
61,490	-		Dshi_3659	0.81	+0.7
61,560	+				+0.2
61,575	-				+0.5
61,589	-				-1.6
61,604	-				+0.2
61,757	+		Dshi_3660	0.19	-0.2
61,862	+		Dshi_3660	0.30	-0.9
61,945	+		Dshi_3660	0.39	-0.6
61,964	+		Dshi_3660	0.41	+1.1
62,184	-		Dshi_3660	0.65	+0.7
62,184	-		Dshi_3660	0.65	-0.5
62,314	-		Dshi_3660	0.79	-1.0
62,332	-		Dshi_3660	0.81	-0.7
62,423	-				-0.6
62,509	-				+0.2