Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3502

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
3,681,487	-		Dshi_3500	0.74	-2.1
3,681,582	-		Dshi_3500	0.86	-0.5
3,681,598	+		Dshi_3500	0.88	-1.0
3,681,606	-		Dshi_3500	0.89	-0.2
3,681,611	+		Dshi_3500	0.90	-0.3
3,681,621	+				-0.5
3,681,722	+				+0.1
3,681,765	+				-1.2
3,681,773	-				+0.2
3,681,773	-				-1.0
3,681,779	+				-0.4
3,681,844	+		Dshi_3501	0.14	+0.0
3,681,890	-		Dshi_3501	0.20	-0.0
3,681,901	-		Dshi_3501	0.21	-0.6
3,681,933	-		Dshi_3501	0.25	-0.6
3,681,983	-		Dshi_3501	0.32	+0.2
3,681,986	+		Dshi_3501	0.33	-1.6
3,681,986	+		Dshi_3501	0.33	-1.1
3,681,986	+		Dshi_3501	0.33	-1.2
3,682,019	+		Dshi_3501	0.37	-2.0
3,682,019	+		Dshi_3501	0.37	-0.5
3,682,019	+		Dshi_3501	0.37	-1.1
3,682,073	+		Dshi_3501	0.44	-1.7
3,682,081	-		Dshi_3501	0.45	-1.8
3,682,091	+		Dshi_3501	0.47	-1.5
3,682,107	+		Dshi_3501	0.49	+1.3
3,682,114	-		Dshi_3501	0.50	+0.1
3,682,206	-		Dshi_3501	0.62	-1.1
3,682,238	+		Dshi_3501	0.66	-0.4
3,682,416	-				-0.3
3,682,430	+				-0.7
3,682,438	-				+0.1
3,682,491	-				+0.1
3,682,546	-				-1.4
3,682,563	-				-1.0
3,682,587	-		Dshi_3502	0.10	-2.6
3,682,611	+		Dshi_3502	0.12	-0.1
3,682,660	+		Dshi_3502	0.17	-0.7
3,682,680	-		Dshi_3502	0.19	-0.9
3,682,680	-		Dshi_3502	0.19	-0.3
3,682,683	+		Dshi_3502	0.20	+0.2
3,682,712	-		Dshi_3502	0.22	-0.4
3,682,718	-		Dshi_3502	0.23	-0.9
3,682,777	+		Dshi_3502	0.29	-1.0
3,682,785	-				+2.5
3,682,821	+		Dshi_3502	0.33	-2.3
3,682,829	-		Dshi_3502	0.34	+0.0
3,682,887	-		Dshi_3502	0.40	+0.3
3,683,069	-		Dshi_3502	0.58	-0.5
3,683,204	+		Dshi_3502	0.71	-0.9
3,683,272	-		Dshi_3502	0.78	-1.3
3,683,284	-		Dshi_3502	0.79	-0.9
3,683,479	+				-0.8
3,683,487	-				+0.3
3,683,515	+				-1.0
3,683,657	+				-0.2
3,683,664	+				-1.5
3,683,758	+		Dshi_3503	0.15	-1.6
3,683,758	+		Dshi_3503	0.15	-1.0
3,683,758	+		Dshi_3503	0.15	-0.2
3,684,027	+		Dshi_3503	0.31	-0.8
3,684,459	-		Dshi_3503	0.56	-1.3