Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3384

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
3,559,271	+				-0.6
3,559,287	+				+0.1
3,559,321	-				+0.6
3,559,519	+		Dshi_3383	0.12	-0.9
3,559,583	-		Dshi_3383	0.21	-0.5
3,559,613	+		Dshi_3383	0.25	+0.5
3,559,836	-		Dshi_3383	0.57	-0.5
3,560,199	-				-0.5
3,560,225	+				-0.8
3,560,289	-				+0.9
3,560,309	+				+0.8
3,560,332	-				-0.6
3,560,358	-				-0.8
3,560,360	+				+0.5
3,560,368	-		Dshi_3384	0.10	+1.0
3,560,404	-		Dshi_3384	0.13	+0.1
3,560,406	+		Dshi_3384	0.13	-0.0
3,560,406	+		Dshi_3384	0.13	-0.8
3,560,414	-		Dshi_3384	0.13	+0.2
3,560,416	+		Dshi_3384	0.13	+0.8
3,560,519	-		Dshi_3384	0.20	-1.8
3,560,534	-		Dshi_3384	0.21	-0.1
3,560,625	+		Dshi_3384	0.26	-0.3
3,560,668	+		Dshi_3384	0.29	+1.2
3,560,676	-		Dshi_3384	0.30	-0.9
3,560,682	-		Dshi_3384	0.30	-1.0
3,560,684	+		Dshi_3384	0.30	-0.1
3,560,804	+		Dshi_3384	0.38	+0.0
3,560,879	+		Dshi_3384	0.42	+2.1
3,560,888	-		Dshi_3384	0.43	+0.5
3,560,895	+		Dshi_3384	0.43	+0.7
3,560,934	+		Dshi_3384	0.46	+0.6
3,560,944	+		Dshi_3384	0.46	-0.3
3,561,041	-		Dshi_3384	0.52	-0.0
3,561,088	+		Dshi_3384	0.55	-0.1
3,561,094	-		Dshi_3384	0.56	+1.1
3,561,096	-		Dshi_3384	0.56	+0.3
3,561,096	-		Dshi_3384	0.56	-0.1
3,561,151	+		Dshi_3384	0.59	+0.4
3,561,225	+		Dshi_3384	0.64	+1.5
3,561,226	-		Dshi_3384	0.64	+0.0
3,561,248	-		Dshi_3384	0.65	-0.5
3,561,268	-		Dshi_3384	0.66	+0.4
3,561,289	-		Dshi_3384	0.68	+0.4
3,561,317	+		Dshi_3384	0.70	+0.9
3,561,325	-		Dshi_3384	0.70	+0.1
3,561,325	-		Dshi_3384	0.70	+0.8
3,561,358	-		Dshi_3384	0.72	+0.5
3,561,432	-		Dshi_3384	0.77	+1.8
3,561,481	-		Dshi_3384	0.80	-0.3
3,561,517	-		Dshi_3384	0.82	+1.0
3,561,556	-		Dshi_3384	0.84	+0.2
3,561,570	-		Dshi_3384	0.85	-0.9
3,561,584	+		Dshi_3384	0.86	+0.9
3,561,647	-				+0.3
3,561,692	+				-0.1
3,561,743	-				+0.9
3,561,779	-				+1.4
3,561,847	-				-1.1
3,561,865	-				-0.1
3,561,865	-				+0.5
3,561,867	+				-0.4
3,561,875	-				+0.0
3,561,877	-				+0.5
3,561,915	-				+0.3
3,561,925	-				-1.1
3,561,974	+				+1.1
3,561,987	-				+0.7
3,562,047	+				+0.2
3,562,055	-				+0.2
3,562,061	-				-0.3
3,562,070	-				-0.6
3,562,075	-				-0.2
3,562,115	-				+0.4
3,562,167	+		Dshi_3385	0.10	+0.4
3,562,191	+		Dshi_3385	0.11	+1.3
3,562,243	-		Dshi_3385	0.14	+0.7
3,562,385	-		Dshi_3385	0.19	-1.0
3,562,387	+		Dshi_3385	0.19	-0.4
3,562,407	+		Dshi_3385	0.20	+0.2
3,562,436	+		Dshi_3385	0.21	-0.3
3,562,441	+		Dshi_3385	0.22	-0.1
3,562,524	+		Dshi_3385	0.25	-0.5
3,562,615	-		Dshi_3385	0.29	-0.4
3,562,678	-		Dshi_3385	0.31	-1.5
3,562,685	+		Dshi_3385	0.32	-0.5
3,562,750	-		Dshi_3385	0.34	+0.8
3,562,766	+		Dshi_3385	0.35	+0.9
3,562,766	+		Dshi_3385	0.35	+0.1