Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3282

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
3,447,857	-		Dshi_3281	0.82	+1.0
3,447,872	-		Dshi_3281	0.82	-0.3
3,447,873	+		Dshi_3281	0.82	+0.3
3,447,873	+		Dshi_3281	0.82	+0.5
3,447,881	-		Dshi_3281	0.82	-0.1
3,447,989	-		Dshi_3281	0.85	-0.4
3,448,060	-		Dshi_3281	0.88	-0.1
3,448,077	+		Dshi_3281	0.88	+0.1
3,448,096	-		Dshi_3281	0.89	+0.6
3,448,134	-		Dshi_3281	0.90	+1.5
3,448,146	+				-1.0
3,448,152	-				-0.2
3,448,186	-				+0.8
3,448,187	-				+0.0
3,448,190	+				-0.5
3,448,272	+				+1.2
3,448,272	+				-0.1
3,448,323	-				+0.3
3,448,368	-				+0.3
3,448,404	+				-2.7
3,448,412	-				+0.7
3,448,475	+				-0.6
3,448,483	-				-0.1
3,448,494	+				+1.2
3,448,523	-				+1.2
3,448,567	+				-0.1
3,448,575	-				+0.1
3,448,655	+				+0.5
3,448,730	-				+0.4
3,448,735	+				-0.1
3,448,735	+				-0.9
3,448,746	+				-1.1
3,448,783	-				-0.2
3,448,796	+				-1.1
3,448,804	-				-0.1
3,448,835	-				+0.5
3,448,882	-		Dshi_3282	0.10	-1.3
3,448,985	-		Dshi_3282	0.22	-0.5
3,449,023	+				+2.5
3,449,023	+		Dshi_3282	0.26	-1.7
3,449,053	-		Dshi_3282	0.30	+0.1
3,449,232	+		Dshi_3282	0.50	+1.5
3,449,267	-		Dshi_3282	0.54	+0.1
3,449,273	-		Dshi_3282	0.55	-0.5
3,449,328	+		Dshi_3282	0.61	+0.3
3,449,515	-		Dshi_3282	0.82	-0.1
3,449,658	+				-0.7
3,449,668	+				+1.0
3,449,695	-				-0.6
3,449,736	+		Dshi_3283	0.10	+0.6
3,450,030	-		Dshi_3283	0.56	+0.5
3,450,148	+		Dshi_3283	0.75	-0.4
3,450,185	-		Dshi_3283	0.81	-0.6
3,450,185	-		Dshi_3283	0.81	-0.9
3,450,227	+		Dshi_3283	0.87	+1.2
3,450,254	+				+0.7
3,450,571	+		Dshi_3284	0.15	-1.0