Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3065

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
3,232,545	-		Dshi_3063	0.80	+0.1
3,232,609	-				-2.0
3,232,637	+				-0.2
3,232,736	+		Dshi_3064	0.14	+0.1
3,232,776	+		Dshi_3064	0.21	+0.2
3,232,902	-		Dshi_3064	0.43	-0.4
3,233,025	+		Dshi_3064	0.65	+0.1
3,233,089	+		Dshi_3064	0.76	-0.6
3,233,100	+		Dshi_3064	0.78	+0.3
3,233,153	+		Dshi_3064	0.87	+0.4
3,233,157	+		Dshi_3064	0.88	+1.3
3,233,165	-		Dshi_3064	0.89	-1.1
3,233,184	+				-0.9
3,233,194	+				+0.1
3,233,201	-				-0.9
3,233,241	-				-0.8
3,233,329	+				+0.1
3,233,363	+				-0.2
3,233,386	+				-0.2
3,233,394	-				+0.6
3,233,418	-				+0.5
3,233,477	-		Dshi_3065	0.16	+1.1
3,233,511	+		Dshi_3065	0.20	-0.4
3,233,528	+		Dshi_3065	0.22	+2.1
3,233,551	+		Dshi_3065	0.25	-1.3
3,233,576	-		Dshi_3065	0.28	+0.4
3,233,659	-		Dshi_3065	0.38	-0.3
3,233,711	+		Dshi_3065	0.44	+0.9
3,233,745	-		Dshi_3065	0.48	-0.3
3,233,822	-		Dshi_3065	0.57	+1.1
3,233,863	+		Dshi_3065	0.62	-0.3
3,233,863	+		Dshi_3065	0.62	-1.1
3,233,864	-		Dshi_3065	0.62	+0.6
3,233,893	+		Dshi_3065	0.66	+0.4
3,233,923	-		Dshi_3065	0.69	-0.4
3,233,973	+		Dshi_3065	0.75	-0.2
3,233,995	+		Dshi_3065	0.78	+0.2
3,234,015	-		Dshi_3065	0.80	+0.5
3,234,116	-				+0.4
3,234,137	+				+1.5
3,234,150	-				+0.7
3,234,152	+				+1.0
3,234,182	-				+0.2
3,234,217	+				+0.2
3,234,255	-				+1.0
3,234,296	+				+0.3
3,234,365	-				+0.7
3,234,370	-				-0.5
3,234,424	-				+0.9
3,234,437	+				+0.8
3,234,437	+				+0.4
3,234,573	+				+1.0
3,234,584	+				+0.7
3,234,768	+		Dshi_3066	0.23	+1.3
3,234,869	+		Dshi_3066	0.31	+1.3
3,234,877	-		Dshi_3066	0.32	+0.5
3,234,890	+		Dshi_3066	0.33	+1.2
3,234,966	+		Dshi_3066	0.39	+1.2
3,234,979	-		Dshi_3066	0.40	+0.2
3,235,156	-		Dshi_3066	0.56	+1.2