Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2741
Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. 1-ethyl-3-methylimidazolium acetate 2 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,902,563 | - | Dshi_2740 | 0.51 | -1.5 | |
| 2,902,645 | - | Dshi_2740 | 0.55 | -0.9 | |
| 2,902,658 | - | Dshi_2740 | 0.56 | +1.0 | |
| 2,902,668 | - | Dshi_2740 | 0.57 | +0.3 | |
| 2,902,795 | + | Dshi_2740 | 0.63 | -0.3 | |
| 2,902,963 | + | Dshi_2740 | 0.72 | -0.4 | |
| 2,903,317 | - | Dshi_2740 | 0.90 | -0.2 | |
| 2,903,319 | - | -1.3 | |||
| 2,903,403 | + | -0.1 | |||
| 2,903,460 | + | +1.0 | |||
| 2,903,514 | - | -0.4 | |||
| 2,903,592 | + | Dshi_2741 | 0.16 | -0.8 | |
| 2,903,592 | + | Dshi_2741 | 0.16 | -1.3 | |
| 2,903,592 | + | Dshi_2741 | 0.16 | -0.5 | |
| 2,903,600 | - | Dshi_2741 | 0.19 | -0.1 | |
| 2,903,752 | + | Dshi_2741 | 0.83 | +0.0 |
Or see this region's nucleotide sequence