Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2111

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
2,238,146	-				+0.4
2,238,168	-				-1.1
2,238,168	-				+0.5
2,238,209	-				+0.8
2,238,290	-		Dshi_2110	0.11	-0.2
2,238,316	+		Dshi_2110	0.14	+0.4
2,238,324	-		Dshi_2110	0.15	-0.5
2,238,441	-		Dshi_2110	0.28	+0.5
2,238,441	-		Dshi_2110	0.28	-0.3
2,238,472	-		Dshi_2110	0.31	-1.4
2,238,551	-		Dshi_2110	0.40	-0.1
2,238,551	-		Dshi_2110	0.40	-0.7
2,238,639	+		Dshi_2110	0.49	+0.5
2,238,643	+		Dshi_2110	0.50	+0.3
2,238,644	-		Dshi_2110	0.50	-0.0
2,238,693	-		Dshi_2110	0.55	-0.4
2,238,718	-		Dshi_2110	0.58	+0.4
2,238,899	+		Dshi_2110	0.78	+0.5
2,239,062	-				-0.2
2,239,088	+				-0.5
2,239,096	-				-0.0
2,239,201	+				-2.3
2,239,201	+				-0.0
2,239,209	-				+0.2
2,239,209	-				-1.2
2,239,253	+		Dshi_2111	0.13	-0.9
2,239,352	-		Dshi_2111	0.24	-0.5
2,239,365	-		Dshi_2111	0.26	-0.5
2,239,394	-		Dshi_2111	0.29	+0.3
2,239,462	+		Dshi_2111	0.36	+0.2
2,239,528	+		Dshi_2111	0.44	-0.7
2,239,535	+		Dshi_2111	0.44	+0.0
2,239,536	-		Dshi_2111	0.45	+0.4
2,239,563	-		Dshi_2111	0.48	-1.1
2,239,658	+		Dshi_2111	0.58	-0.2
2,239,738	+		Dshi_2111	0.67	-0.7
2,239,738	+		Dshi_2111	0.67	-0.3
2,239,746	-		Dshi_2111	0.68	-0.1
2,239,746	-		Dshi_2111	0.68	-0.1
2,239,864	+		Dshi_2111	0.81	+1.0
2,239,888	-		Dshi_2111	0.83	-0.4
2,239,936	+		Dshi_2111	0.89	-0.5
2,239,957	-				-0.4
2,240,065	+				-0.8
2,240,190	+		Dshi_5008	0.13	+1.2
2,240,299	-		Dshi_5008	0.21	+0.6
2,240,299	-		Dshi_5008	0.21	-0.6
2,240,384	+		Dshi_5008	0.27	+0.2
2,240,419	+		Dshi_5008	0.29	-1.5
2,240,427	-		Dshi_5008	0.30	-1.4
2,240,444	-		Dshi_5008	0.31	+0.7
2,240,573	-		Dshi_5008	0.40	+0.3
2,240,606	-		Dshi_5008	0.43	-0.0
2,240,725	+		Dshi_5008	0.51	-0.2
2,240,735	+		Dshi_5008	0.52	-0.4
2,240,753	+		Dshi_5008	0.53	-0.7
2,240,768	+		Dshi_5008	0.54	-1.4
2,240,812	+		Dshi_5008	0.57	+0.1
2,240,860	+		Dshi_5008	0.61	+0.7
2,240,860	+		Dshi_5008	0.61	+0.5
2,240,868	-		Dshi_5008	0.61	+0.5
2,240,899	+		Dshi_5008	0.63	-0.3
2,240,952	-		Dshi_5008	0.67	-0.6
2,240,972	+		Dshi_5008	0.69	+0.6
2,240,972	-		Dshi_5008	0.69	-0.0
2,240,998	+		Dshi_5008	0.70	+0.8
2,241,009	-		Dshi_5008	0.71	+0.1