Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_R0035

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
1,890,321	+		Dshi_1813	0.49	-0.2
1,890,531	+		Dshi_1813	0.65	-0.1
1,890,539	-		Dshi_1813	0.66	+0.9
1,890,560	+		Dshi_1813	0.67	+1.1
1,890,573	-		Dshi_1813	0.68	+0.9
1,890,591	-		Dshi_1813	0.70	+1.1
1,890,607	-		Dshi_1813	0.71	+0.9
1,890,642	+		Dshi_1813	0.74	+0.4
1,890,650	-		Dshi_1813	0.74	+0.5
1,890,650	-		Dshi_1813	0.74	+0.6
1,890,801	+		Dshi_1813	0.86	-0.7
1,890,869	+				+0.3
1,890,869	+				-1.3
1,890,959	-				+1.9
1,890,960	-				+0.7
1,890,960	-				-0.2
1,890,982	-				+0.1
1,891,246	+				+0.1
1,891,251	-				+0.1
1,891,483	-				-0.3
1,891,594	+				-0.4
1,891,594	+				-0.1
1,891,604	+				+0.8
1,891,607	-				+0.9
1,891,628	+				+1.8
1,891,628	+				-0.3
1,891,636	-				-0.5
1,891,636	-				-0.8
1,891,684	+				+0.1
1,891,685	-				-0.8
1,891,692	+				+0.1
1,891,692	-				+0.8
1,891,734	+				+0.8
1,891,740	-				+0.0
1,891,825	+		Dshi_1814	0.11	-0.1
1,891,831	-		Dshi_1814	0.11	+0.0
1,891,869	-		Dshi_1814	0.14	-0.7
1,891,960	-		Dshi_1814	0.22	+0.1
1,892,038	-		Dshi_1814	0.29	-0.9
1,892,075	+		Dshi_1814	0.32	-1.2
1,892,093	+		Dshi_1814	0.34	+0.5
1,892,096	-		Dshi_1814	0.34	-0.1
1,892,154	-		Dshi_1814	0.39	-1.6
1,892,178	+		Dshi_1814	0.41	-0.8
1,892,228	+		Dshi_1814	0.45	-1.3
1,892,288	-		Dshi_1814	0.50	-0.0
1,892,307	-		Dshi_1814	0.52	+1.2