Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1612

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
1,674,950	+				+0.3
1,675,029	+				+1.5
1,675,031	+				-0.5
1,675,082	-		Dshi_1611	0.14	-0.6
1,675,096	+		Dshi_1611	0.15	-0.6
1,675,104	-		Dshi_1611	0.16	-2.1
1,675,124	+		Dshi_1611	0.18	-2.5
1,675,214	-		Dshi_1611	0.28	-2.0
1,675,501	+		Dshi_1611	0.59	-1.0
1,675,506	-		Dshi_1611	0.59	-1.4
1,675,509	-		Dshi_1611	0.60	-0.9
1,675,585	-		Dshi_1611	0.68	+0.0
1,675,690	+		Dshi_1611	0.79	-1.2
1,675,884	-				-0.8
1,675,970	+		Dshi_1612	0.11	+0.0
1,675,973	-		Dshi_1612	0.12	-0.2
1,675,978	-		Dshi_1612	0.12	+0.4
1,676,036	+		Dshi_1612	0.19	+0.1
1,676,322	-		Dshi_1612	0.55	-1.1
1,676,337	+		Dshi_1612	0.57	+0.8
1,676,492	-		Dshi_1612	0.76	-0.5
1,676,521	-		Dshi_1612	0.80	+0.5
1,676,521	-		Dshi_1612	0.80	-0.1
1,676,538	+		Dshi_1612	0.82	+0.1
1,676,692	+				-1.3
1,676,692	+				-0.5
1,676,692	+				-1.5
1,676,693	-				-0.8
1,676,693	-				-1.0
1,676,700	-				-0.3
1,676,700	-				+0.2
1,676,732	+				-0.2
1,676,740	+				+0.2
1,676,748	-				-0.9
1,676,906	-		Dshi_1613	0.12	+1.5