Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1356

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
1,407,705	-		Dshi_1355	0.20	+0.3
1,407,711	+		Dshi_1355	0.21	-0.0
1,407,721	-		Dshi_1355	0.22	+0.4
1,407,757	+		Dshi_1355	0.25	-0.3
1,407,836	+		Dshi_1355	0.31	-0.2
1,407,892	+		Dshi_1355	0.36	+0.3
1,408,002	-		Dshi_1355	0.45	+1.3
1,408,002	-		Dshi_1355	0.45	-0.5
1,408,085	-		Dshi_1355	0.52	-0.2
1,408,120	-		Dshi_1355	0.54	-0.5
1,408,176	+		Dshi_1355	0.59	+0.0
1,408,176	+		Dshi_1355	0.59	+0.5
1,408,176	+		Dshi_1355	0.59	-0.4
1,408,181	+		Dshi_1355	0.59	-0.3
1,408,181	+		Dshi_1355	0.59	+0.0
1,408,287	+		Dshi_1355	0.68	-0.6
1,408,373	+		Dshi_1355	0.75	+0.3
1,408,553	+				+0.6
1,408,564	+				+0.9
1,408,576	+				-0.3
1,408,604	-				+0.7
1,408,631	+				+0.3
1,408,766	-				-0.2
1,408,768	-				-0.5
1,408,778	-				-0.5
1,408,959	+		Dshi_1356	0.23	-1.7
1,409,128	-		Dshi_1356	0.36	+0.1
1,409,147	-		Dshi_1356	0.37	+0.1
1,409,232	+		Dshi_1356	0.44	-0.6
1,409,243	-		Dshi_1356	0.45	+0.1
1,409,294	-		Dshi_1356	0.49	+0.5
1,409,308	-		Dshi_1356	0.50	+0.2
1,409,397	-		Dshi_1356	0.57	+0.3
1,409,407	-		Dshi_1356	0.58	+0.6
1,409,429	-		Dshi_1356	0.60	+0.2
1,409,429	-		Dshi_1356	0.60	-0.9
1,409,440	-		Dshi_1356	0.60	+0.0
1,409,470	+		Dshi_1356	0.63	-0.1
1,409,470	+		Dshi_1356	0.63	+0.2
1,409,478	-		Dshi_1356	0.63	-0.9
1,409,767	+		Dshi_1356	0.86	-0.8
1,409,840	+				-0.2
1,409,910	+				+0.1
1,409,939	+				-0.1
1,409,939	+				-0.8
1,410,088	+		Dshi_1357	0.15	-1.5
1,410,122	+		Dshi_1357	0.18	-0.8
1,410,152	+		Dshi_1357	0.21	-0.3
1,410,162	+				+1.5
1,410,179	-		Dshi_1357	0.24	+0.2
1,410,359	+		Dshi_1357	0.41	-1.0
1,410,389	+				+0.8
1,410,477	-		Dshi_1357	0.52	+0.0
1,410,487	+		Dshi_1357	0.53	-0.6
1,410,581	+		Dshi_1357	0.62	-0.1
1,410,638	+		Dshi_1357	0.67	-0.6
1,410,801	+		Dshi_1357	0.83	-0.6
1,410,880	-				+0.2