Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1142
Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. 1-ethyl-3-methylimidazolium acetate 2 mM |
---|---|---|---|---|---|
remove | |||||
1,169,040 | + | +0.1 | |||
1,169,150 | + | Dshi_1141 | 0.16 | -1.1 | |
1,169,361 | + | Dshi_1141 | 0.38 | -2.2 | |
1,169,581 | - | Dshi_1141 | 0.60 | -2.3 | |
1,169,647 | + | Dshi_1141 | 0.67 | -1.4 | |
1,169,657 | + | Dshi_1141 | 0.68 | +0.5 | |
1,169,843 | + | Dshi_1141 | 0.87 | -0.4 | |
1,169,909 | + | +0.2 | |||
1,170,002 | + | Dshi_1142 | 0.12 | -1.7 | |
1,170,118 | + | Dshi_1142 | 0.75 | -2.0 | |
1,170,673 | + | Dshi_1143 | 0.84 | +0.2 |
Or see this region's nucleotide sequence