Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0415

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
408,037	-		Dshi_0413	0.56	-0.7
408,075	+		Dshi_0413	0.66	+0.3
408,083	-		Dshi_0413	0.69	-0.2
408,133	-		Dshi_0413	0.82	-2.0
408,133	-		Dshi_0413	0.82	+1.2
408,136	+		Dshi_0413	0.83	+0.3
408,167	+				+0.9
408,171	-				-1.4
408,231	-				-0.3
408,268	+				+0.7
408,276	-				+0.6
408,281	-				-1.1
408,291	+				-0.3
408,301	-				-1.7
408,321	+				-0.1
408,324	-				-0.7
408,336	-				+1.0
408,336	-				+0.3
408,336	-				+0.3
408,353	-				-0.4
408,392	-				-0.3
408,508	+		Dshi_0414	0.18	-1.2
408,537	-		Dshi_0414	0.25	+0.7
408,560	+		Dshi_0414	0.30	-0.9
408,581	-		Dshi_0414	0.34	+0.3
408,600	+		Dshi_0414	0.39	-2.0
408,608	-		Dshi_0414	0.40	-0.4
408,639	+		Dshi_0414	0.47	+0.3
408,699	+		Dshi_0414	0.61	+0.3
408,769	+		Dshi_0414	0.77	-0.4
408,912	+				-0.4
408,966	-				-0.1
408,966	-				-1.4
409,001	-				-0.1
409,015	+				+0.8
409,025	-				+0.2
409,073	-		Dshi_0415	0.22	-0.0
409,074	-		Dshi_0415	0.22	+0.7
409,107	-		Dshi_0415	0.36	+0.5
409,135	+		Dshi_0415	0.47	-1.5
409,143	-		Dshi_0415	0.51	-0.5
409,155	+		Dshi_0415	0.56	-0.3
409,210	+		Dshi_0415	0.78	+0.1
409,218	-		Dshi_0415	0.81	-1.0
409,220	+		Dshi_0415	0.82	-0.3
409,228	-		Dshi_0415	0.86	+0.1
409,232	+				-1.3
409,232	+		Dshi_0415	0.87	-0.6
409,235	-		Dshi_0415	0.88	-0.7
409,240	-				+0.8
409,242	+				+0.5
409,249	-				+1.1
409,264	-				-1.1
409,264	-				-0.1
409,277	-				+0.1
409,291	-				+1.1
409,291	-				-0.4
409,291	-				+0.7
409,298	-				+0.8
409,298	-				+0.1
409,298	-				-0.5
409,326	+				+0.2
409,350	+				-0.2
409,396	+				-0.2
409,399	+				+0.1
409,407	+				+3.8
409,429	+				-0.3
409,429	+				+0.7
409,429	+				+0.5
409,437	-				+0.0
409,448	-				+0.3
409,448	-				-0.5
409,449	+				+0.1
409,511	+				-1.1
409,531	-				-0.3
409,566	+				-0.5
409,572	-				+0.6
409,587	-				-1.4
409,587	-				-0.0
409,597	-				-0.8
409,600	-				-0.2
409,624	-				-0.0
409,676	-		Dshi_0416	0.22	+0.2
409,680	+		Dshi_0416	0.23	-0.4
409,688	-		Dshi_0416	0.26	-0.6
409,688	-		Dshi_0416	0.26	-0.6
409,901	-				-0.1
409,928	-				-1.7
409,973	+				-0.1
409,991	-				-0.1
409,996	-				-0.6
410,006	-				+0.3
410,042	+		Dshi_0417	0.19	+0.2
410,044	-		Dshi_0417	0.20	+1.9
410,055	-		Dshi_0417	0.25	-0.1
410,067	-		Dshi_0417	0.31	-0.2
410,103	-		Dshi_0417	0.48	-0.4
410,109	-		Dshi_0417	0.51	-0.9
410,169	-		Dshi_0417	0.80	-0.4