Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0025

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 2 mM
28,889	+				+0.5
28,945	-				-1.1
28,964	-				+0.9
29,006	+				+0.2
29,006	+				-0.7
29,190	+				+0.5
29,191	+				-1.0
29,198	-				+0.4
29,337	-		Dshi_0025	0.29	+0.5
29,390	+		Dshi_0025	0.37	+0.6
29,398	-		Dshi_0025	0.38	+0.6
29,434	+		Dshi_0025	0.43	+0.5
29,436	-		Dshi_0025	0.44	-0.1
29,463	-		Dshi_0025	0.48	+0.9
29,469	+		Dshi_0025	0.49	+0.0
29,575	+		Dshi_0025	0.64	+0.9
29,586	+		Dshi_0025	0.66	+0.3
29,667	+		Dshi_0025	0.78	-2.2
29,723	+		Dshi_0025	0.86	+0.7
29,731	-				+0.2
29,821	-				+0.3
29,822	-				-0.7
29,838	-				+1.4
29,996	+		Dshi_0026	0.17	+0.5
30,039	-		Dshi_0026	0.24	+0.7
30,258	-		Dshi_0026	0.58	+0.6
30,314	+		Dshi_0026	0.66	-0.3
30,337	-		Dshi_0026	0.70	-0.1
30,341	+		Dshi_0026	0.71	+0.1
30,341	+		Dshi_0026	0.71	+0.3
30,351	+		Dshi_0026	0.72	-0.3
30,395	+		Dshi_0026	0.79	-0.9
30,403	-		Dshi_0026	0.80	+0.3
30,419	+		Dshi_0026	0.83	-3.0
30,703	-				+0.3
30,756	+				-1.5
30,780	+		Dshi_0027	0.11	-0.6
30,811	+		Dshi_0027	0.14	-1.7