Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04618 and H281DRAFT_04619 are separated by 72 nucleotides H281DRAFT_04619 and H281DRAFT_04620 are separated by 76 nucleotides H281DRAFT_04620 and H281DRAFT_04621 are separated by 113 nucleotides H281DRAFT_04621 and H281DRAFT_04622 overlap by 4 nucleotides
H281DRAFT_04618: H281DRAFT_04618 - putative regulatory protein, FmdB family, at 12,384 to 12,764
_04618
H281DRAFT_04619: H281DRAFT_04619 - Uncharacterized membrane protein, at 12,837 to 13,490
_04619
H281DRAFT_04620: H281DRAFT_04620 - aspartyl-tRNA synthetase, at 13,567 to 15,366
_04620
H281DRAFT_04621: H281DRAFT_04621 - dihydroneopterin triphosphate pyrophosphatase, at 15,480 to 16,073
_04621
H281DRAFT_04622: H281DRAFT_04622 - putative cardiolipin synthase, at 16,070 to 17,329
_04622
Position (kb) 13
14
15
16 Strain fitness (log2 ratio) -2
-1
0
1 at 13.140 kb on + strand, within H281DRAFT_04619 at 13.218 kb on + strand, within H281DRAFT_04619 at 13.238 kb on + strand, within H281DRAFT_04619 at 13.311 kb on + strand, within H281DRAFT_04619 at 13.311 kb on + strand, within H281DRAFT_04619 at 13.410 kb on + strand, within H281DRAFT_04619 at 13.410 kb on + strand, within H281DRAFT_04619 at 13.488 kb on + strand at 13.542 kb on + strand at 15.345 kb on + strand at 15.443 kb on + strand at 15.458 kb on - strand at 15.458 kb on - strand at 15.555 kb on + strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.556 kb on - strand, within H281DRAFT_04621 at 15.620 kb on - strand, within H281DRAFT_04621 at 15.620 kb on - strand, within H281DRAFT_04621 at 15.635 kb on + strand, within H281DRAFT_04621 at 15.635 kb on + strand, within H281DRAFT_04621 at 15.635 kb on + strand, within H281DRAFT_04621 at 15.636 kb on - strand, within H281DRAFT_04621 at 15.636 kb on - strand, within H281DRAFT_04621 at 15.636 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.844 kb on - strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.907 kb on + strand, within H281DRAFT_04621 at 15.908 kb on - strand, within H281DRAFT_04621 at 15.975 kb on + strand, within H281DRAFT_04621 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.253 kb on + strand, within H281DRAFT_04622 at 16.254 kb on - strand, within H281DRAFT_04622 at 16.254 kb on - strand, within H281DRAFT_04622
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 13,140 + H281DRAFT_04619 0.46 +0.4 13,218 + H281DRAFT_04619 0.58 -0.8 13,238 + H281DRAFT_04619 0.61 -1.1 13,311 + H281DRAFT_04619 0.72 -1.6 13,311 + H281DRAFT_04619 0.72 -0.8 13,410 + H281DRAFT_04619 0.88 -0.5 13,410 + H281DRAFT_04619 0.88 -0.6 13,488 + +0.1 13,542 + +0.3 15,345 + +0.0 15,443 + +0.1 15,458 - +0.2 15,458 - -0.6 15,555 + H281DRAFT_04621 0.13 +0.2 15,556 - H281DRAFT_04621 0.13 -0.6 15,556 - H281DRAFT_04621 0.13 +0.0 15,556 - H281DRAFT_04621 0.13 -0.0 15,556 - H281DRAFT_04621 0.13 -1.4 15,556 - H281DRAFT_04621 0.13 -1.0 15,620 - H281DRAFT_04621 0.24 +0.4 15,620 - H281DRAFT_04621 0.24 +0.7 15,635 + H281DRAFT_04621 0.26 -0.0 15,635 + H281DRAFT_04621 0.26 -1.6 15,635 + H281DRAFT_04621 0.26 +0.7 15,636 - H281DRAFT_04621 0.26 -0.9 15,636 - H281DRAFT_04621 0.26 -2.4 15,636 - H281DRAFT_04621 0.26 -1.8 15,844 - H281DRAFT_04621 0.61 -1.2 15,844 - H281DRAFT_04621 0.61 -2.5 15,844 - H281DRAFT_04621 0.61 +0.1 15,844 - H281DRAFT_04621 0.61 -0.5 15,907 + H281DRAFT_04621 0.72 -0.2 15,907 + H281DRAFT_04621 0.72 -0.2 15,907 + H281DRAFT_04621 0.72 -0.5 15,907 + H281DRAFT_04621 0.72 +0.6 15,908 - H281DRAFT_04621 0.72 -1.2 15,975 + H281DRAFT_04621 0.83 +0.1 16,253 + H281DRAFT_04622 0.15 -1.4 16,253 + H281DRAFT_04622 0.15 -1.0 16,253 + H281DRAFT_04622 0.15 -2.1 16,253 + H281DRAFT_04622 0.15 -1.9 16,253 + H281DRAFT_04622 0.15 -0.7 16,254 - H281DRAFT_04622 0.15 -1.7 16,254 - H281DRAFT_04622 0.15 -2.6
Or see this region's nucleotide sequence