Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04600 and H281DRAFT_04601 are separated by 189 nucleotides H281DRAFT_04601 and H281DRAFT_04602 are separated by 189 nucleotides H281DRAFT_04602 and H281DRAFT_04603 are separated by 109 nucleotides
H281DRAFT_04600: H281DRAFT_04600 - Murein tripeptide amidase MpaA, at 331,775 to 332,929
_04600
H281DRAFT_04601: H281DRAFT_04601 - hypothetical protein, at 333,119 to 333,748
_04601
H281DRAFT_04602: H281DRAFT_04602 - Uncharacterized membrane protein, at 333,938 to 334,612
_04602
H281DRAFT_04603: H281DRAFT_04603 - two component transcriptional regulator, LuxR family, at 334,722 to 335,600
_04603
Position (kb) 333
334 Strain fitness (log2 ratio) -1
0
1
2 at 332.384 kb on + strand, within H281DRAFT_04600 at 332.385 kb on - strand, within H281DRAFT_04600 at 332.402 kb on + strand, within H281DRAFT_04600 at 332.402 kb on + strand, within H281DRAFT_04600 at 332.403 kb on - strand, within H281DRAFT_04600 at 332.523 kb on + strand, within H281DRAFT_04600 at 332.524 kb on - strand, within H281DRAFT_04600 at 332.524 kb on - strand, within H281DRAFT_04600 at 332.526 kb on + strand, within H281DRAFT_04600 at 332.526 kb on + strand, within H281DRAFT_04600 at 332.526 kb on + strand, within H281DRAFT_04600 at 332.527 kb on - strand, within H281DRAFT_04600 at 332.598 kb on - strand, within H281DRAFT_04600 at 332.598 kb on - strand, within H281DRAFT_04600 at 332.712 kb on - strand, within H281DRAFT_04600 at 332.766 kb on - strand, within H281DRAFT_04600 at 332.766 kb on - strand, within H281DRAFT_04600 at 332.913 kb on + strand at 332.913 kb on + strand at 332.913 kb on + strand at 332.913 kb on + strand at 332.914 kb on - strand at 332.963 kb on + strand at 332.963 kb on + strand at 332.963 kb on + strand at 332.963 kb on + strand at 332.963 kb on + strand at 332.963 kb on + strand at 332.964 kb on - strand at 332.964 kb on - strand at 332.964 kb on - strand at 332.964 kb on - strand at 332.964 kb on - strand at 333.008 kb on + strand at 333.009 kb on - strand at 333.009 kb on - strand at 333.066 kb on + strand at 333.110 kb on - strand at 333.120 kb on + strand at 333.143 kb on - strand at 333.248 kb on - strand, within H281DRAFT_04601 at 333.398 kb on - strand, within H281DRAFT_04601 at 333.505 kb on + strand, within H281DRAFT_04601 at 333.505 kb on + strand, within H281DRAFT_04601 at 333.505 kb on + strand, within H281DRAFT_04601 at 333.720 kb on - strand at 333.750 kb on + strand at 333.751 kb on - strand at 333.751 kb on - strand at 333.751 kb on - strand at 333.784 kb on + strand at 333.784 kb on + strand at 333.784 kb on + strand at 333.784 kb on + strand at 333.784 kb on + strand at 333.785 kb on - strand at 333.785 kb on - strand at 333.785 kb on - strand at 333.785 kb on - strand at 333.785 kb on - strand at 333.978 kb on + strand at 333.978 kb on + strand at 333.978 kb on + strand at 333.978 kb on + strand at 333.978 kb on + strand at 333.979 kb on - strand at 333.979 kb on - strand at 333.979 kb on - strand at 333.979 kb on - strand at 333.979 kb on - strand at 333.979 kb on - strand at 333.979 kb on - strand at 334.064 kb on + strand, within H281DRAFT_04602 at 334.065 kb on - strand, within H281DRAFT_04602 at 334.065 kb on - strand, within H281DRAFT_04602 at 334.077 kb on + strand, within H281DRAFT_04602 at 334.376 kb on + strand, within H281DRAFT_04602 at 334.376 kb on + strand, within H281DRAFT_04602 at 334.452 kb on - strand, within H281DRAFT_04602 at 334.452 kb on - strand, within H281DRAFT_04602 at 334.621 kb on + strand at 334.621 kb on + strand at 334.622 kb on - strand at 334.622 kb on - strand at 334.622 kb on - strand at 334.622 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 332,384 + H281DRAFT_04600 0.53 +0.0 332,385 - H281DRAFT_04600 0.53 +0.3 332,402 + H281DRAFT_04600 0.54 +0.4 332,402 + H281DRAFT_04600 0.54 +1.1 332,403 - H281DRAFT_04600 0.54 -0.8 332,523 + H281DRAFT_04600 0.65 +0.9 332,524 - H281DRAFT_04600 0.65 +0.3 332,524 - H281DRAFT_04600 0.65 -0.2 332,526 + H281DRAFT_04600 0.65 +0.5 332,526 + H281DRAFT_04600 0.65 +0.6 332,526 + H281DRAFT_04600 0.65 -0.2 332,527 - H281DRAFT_04600 0.65 +0.8 332,598 - H281DRAFT_04600 0.71 +0.5 332,598 - H281DRAFT_04600 0.71 -0.4 332,712 - H281DRAFT_04600 0.81 +0.1 332,766 - H281DRAFT_04600 0.86 +0.5 332,766 - H281DRAFT_04600 0.86 -0.1 332,913 + +0.4 332,913 + -0.3 332,913 + +1.2 332,913 + +1.2 332,914 - +0.2 332,963 + +0.1 332,963 + +0.2 332,963 + +0.9 332,963 + -0.4 332,963 + -0.7 332,963 + +0.2 332,964 - +0.2 332,964 - +0.2 332,964 - +0.5 332,964 - +0.8 332,964 - +0.0 333,008 + +0.5 333,009 - -0.1 333,009 - -0.3 333,066 + -0.4 333,110 - -0.7 333,120 + +0.2 333,143 - +0.6 333,248 - H281DRAFT_04601 0.20 +1.4 333,398 - H281DRAFT_04601 0.44 +1.7 333,505 + H281DRAFT_04601 0.61 +1.6 333,505 + H281DRAFT_04601 0.61 +1.5 333,505 + H281DRAFT_04601 0.61 +2.0 333,720 - +1.5 333,750 + +1.5 333,751 - +0.8 333,751 - +0.9 333,751 - +1.3 333,784 + +2.1 333,784 + +1.9 333,784 + +1.4 333,784 + +1.4 333,784 + +0.9 333,785 - +0.9 333,785 - +1.7 333,785 - +0.9 333,785 - +0.9 333,785 - +0.7 333,978 + +0.1 333,978 + -0.7 333,978 + +0.5 333,978 + -0.5 333,978 + +0.6 333,979 - -0.1 333,979 - -0.0 333,979 - -0.7 333,979 - -1.5 333,979 - -0.6 333,979 - -0.0 333,979 - -0.6 334,064 + H281DRAFT_04602 0.19 +0.2 334,065 - H281DRAFT_04602 0.19 +0.5 334,065 - H281DRAFT_04602 0.19 -0.0 334,077 + H281DRAFT_04602 0.21 -0.1 334,376 + H281DRAFT_04602 0.65 +0.3 334,376 + H281DRAFT_04602 0.65 +0.6 334,452 - H281DRAFT_04602 0.76 +0.2 334,452 - H281DRAFT_04602 0.76 -0.4 334,621 + -0.5 334,621 + +0.3 334,622 - +0.4 334,622 - -0.1 334,622 - +0.6 334,622 - +0.2
Or see this region's nucleotide sequence