Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04474 and H281DRAFT_04475 are separated by 203 nucleotides H281DRAFT_04475 and H281DRAFT_04476 are separated by 11 nucleotides
H281DRAFT_04474: H281DRAFT_04474 - RND family efflux transporter, MFP subunit, at 203,759 to 204,619
_04474
H281DRAFT_04475: H281DRAFT_04475 - Uncharacterized membrane protein YccC, at 204,823 to 207,033
_04475
H281DRAFT_04476: H281DRAFT_04476 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 207,045 to 208,709
_04476
Position (kb) 204
205
206
207
208 Strain fitness (log2 ratio) -2
-1
0
1
2 at 203.928 kb on + strand, within H281DRAFT_04474 at 204.039 kb on + strand, within H281DRAFT_04474 at 204.039 kb on + strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.136 kb on - strand, within H281DRAFT_04474 at 204.191 kb on + strand, within H281DRAFT_04474 at 204.378 kb on + strand at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.578 kb on + strand at 204.579 kb on - strand at 204.802 kb on + strand at 204.932 kb on - strand at 204.932 kb on - strand at 204.932 kb on - strand at 205.125 kb on - strand, within H281DRAFT_04475 at 205.456 kb on - strand, within H281DRAFT_04475 at 205.472 kb on + strand, within H281DRAFT_04475 at 205.637 kb on + strand, within H281DRAFT_04475 at 205.638 kb on - strand, within H281DRAFT_04475 at 205.807 kb on + strand, within H281DRAFT_04475 at 205.934 kb on + strand, within H281DRAFT_04475 at 205.934 kb on + strand, within H281DRAFT_04475 at 205.934 kb on + strand, within H281DRAFT_04475 at 205.962 kb on - strand, within H281DRAFT_04475 at 206.063 kb on + strand, within H281DRAFT_04475 at 206.064 kb on - strand, within H281DRAFT_04475 at 206.064 kb on - strand, within H281DRAFT_04475 at 206.064 kb on - strand, within H281DRAFT_04475 at 206.157 kb on - strand, within H281DRAFT_04475 at 206.157 kb on - strand, within H281DRAFT_04475 at 206.429 kb on + strand, within H281DRAFT_04475 at 206.429 kb on + strand, within H281DRAFT_04475 at 206.429 kb on + strand, within H281DRAFT_04475 at 206.430 kb on - strand, within H281DRAFT_04475 at 206.933 kb on + strand at 206.933 kb on + strand at 206.933 kb on + strand at 206.933 kb on + strand at 206.933 kb on - strand at 206.934 kb on - strand at 207.440 kb on - strand, within H281DRAFT_04476 at 207.662 kb on + strand, within H281DRAFT_04476 at 208.021 kb on - strand, within H281DRAFT_04476 at 208.021 kb on - strand, within H281DRAFT_04476
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 203,928 + H281DRAFT_04474 0.20 +0.8 204,039 + H281DRAFT_04474 0.33 +0.5 204,039 + H281DRAFT_04474 0.33 -0.5 204,046 - H281DRAFT_04474 0.33 +0.6 204,046 - H281DRAFT_04474 0.33 +1.0 204,046 - H281DRAFT_04474 0.33 -2.0 204,136 - H281DRAFT_04474 0.44 +0.7 204,191 + H281DRAFT_04474 0.50 +0.2 204,378 + +0.2 204,531 + H281DRAFT_04474 0.90 +0.6 204,531 + H281DRAFT_04474 0.90 +1.5 204,531 + H281DRAFT_04474 0.90 +0.9 204,531 + H281DRAFT_04474 0.90 +1.0 204,532 - H281DRAFT_04474 0.90 +1.1 204,532 - H281DRAFT_04474 0.90 +1.0 204,532 - H281DRAFT_04474 0.90 +2.4 204,532 - H281DRAFT_04474 0.90 +1.1 204,578 + +0.7 204,579 - +0.4 204,802 + -0.6 204,932 - -1.0 204,932 - +0.5 204,932 - +0.7 205,125 - H281DRAFT_04475 0.14 +0.8 205,456 - H281DRAFT_04475 0.29 -0.5 205,472 + H281DRAFT_04475 0.29 +1.3 205,637 + H281DRAFT_04475 0.37 +1.3 205,638 - H281DRAFT_04475 0.37 +0.9 205,807 + H281DRAFT_04475 0.45 +1.0 205,934 + H281DRAFT_04475 0.50 +0.7 205,934 + H281DRAFT_04475 0.50 +1.0 205,934 + H281DRAFT_04475 0.50 +1.2 205,962 - H281DRAFT_04475 0.52 +0.8 206,063 + H281DRAFT_04475 0.56 +1.3 206,064 - H281DRAFT_04475 0.56 +1.2 206,064 - H281DRAFT_04475 0.56 -2.5 206,064 - H281DRAFT_04475 0.56 +1.1 206,157 - H281DRAFT_04475 0.60 +0.9 206,157 - H281DRAFT_04475 0.60 +0.8 206,429 + H281DRAFT_04475 0.73 +1.0 206,429 + H281DRAFT_04475 0.73 -0.1 206,429 + H281DRAFT_04475 0.73 +0.2 206,430 - H281DRAFT_04475 0.73 +0.5 206,933 + +1.6 206,933 + +1.3 206,933 + +1.7 206,933 + +0.7 206,933 - +0.9 206,934 - +0.9 207,440 - H281DRAFT_04476 0.24 +0.7 207,662 + H281DRAFT_04476 0.37 +0.2 208,021 - H281DRAFT_04476 0.59 +1.3 208,021 - H281DRAFT_04476 0.59 +0.7
Or see this region's nucleotide sequence