Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04059 and H281DRAFT_04060 overlap by 1 nucleotides H281DRAFT_04060 and H281DRAFT_04061 are separated by 18 nucleotides H281DRAFT_04061 and H281DRAFT_04062 are separated by 22 nucleotides
H281DRAFT_04059: H281DRAFT_04059 - amino acid/amide ABC transporter ATP-binding protein 2, HAAT family, at 160,475 to 161,197
_04059
H281DRAFT_04060: H281DRAFT_04060 - amino acid/amide ABC transporter ATP-binding protein 1, HAAT family, at 161,197 to 161,970
_04060
H281DRAFT_04061: H281DRAFT_04061 - amino acid/amide ABC transporter membrane protein 2, HAAT family, at 161,989 to 163,158
_04061
H281DRAFT_04062: H281DRAFT_04062 - amino acid/amide ABC transporter membrane protein 1, HAAT family, at 163,181 to 164,131
_04062
Position (kb) 161
162
163
164 Strain fitness (log2 ratio) -1
0
1
2 at 161.001 kb on + strand, within H281DRAFT_04059 at 161.001 kb on + strand, within H281DRAFT_04059 at 161.001 kb on + strand, within H281DRAFT_04059 at 161.002 kb on - strand, within H281DRAFT_04059 at 161.023 kb on - strand, within H281DRAFT_04059 at 161.149 kb on - strand at 161.219 kb on + strand at 161.522 kb on + strand, within H281DRAFT_04060 at 161.522 kb on + strand, within H281DRAFT_04060 at 161.523 kb on - strand, within H281DRAFT_04060 at 161.532 kb on - strand, within H281DRAFT_04060 at 161.549 kb on + strand, within H281DRAFT_04060 at 161.715 kb on + strand, within H281DRAFT_04060 at 161.725 kb on - strand, within H281DRAFT_04060 at 161.725 kb on - strand, within H281DRAFT_04060 at 161.744 kb on + strand, within H281DRAFT_04060 at 161.745 kb on - strand, within H281DRAFT_04060 at 161.745 kb on - strand, within H281DRAFT_04060 at 161.762 kb on + strand, within H281DRAFT_04060 at 161.804 kb on + strand, within H281DRAFT_04060 at 161.805 kb on - strand, within H281DRAFT_04060 at 161.815 kb on - strand, within H281DRAFT_04060 at 161.962 kb on - strand at 162.110 kb on + strand, within H281DRAFT_04061 at 162.111 kb on - strand, within H281DRAFT_04061 at 162.399 kb on + strand, within H281DRAFT_04061 at 162.530 kb on + strand, within H281DRAFT_04061 at 162.531 kb on - strand, within H281DRAFT_04061 at 162.533 kb on + strand, within H281DRAFT_04061 at 162.533 kb on + strand, within H281DRAFT_04061 at 162.534 kb on - strand, within H281DRAFT_04061 at 162.536 kb on + strand, within H281DRAFT_04061 at 162.536 kb on + strand, within H281DRAFT_04061 at 162.536 kb on + strand, within H281DRAFT_04061 at 162.537 kb on - strand, within H281DRAFT_04061 at 162.537 kb on - strand, within H281DRAFT_04061 at 162.542 kb on + strand, within H281DRAFT_04061 at 162.543 kb on - strand, within H281DRAFT_04061 at 162.722 kb on + strand, within H281DRAFT_04061 at 162.722 kb on + strand, within H281DRAFT_04061 at 162.757 kb on + strand, within H281DRAFT_04061 at 162.895 kb on - strand, within H281DRAFT_04061 at 162.921 kb on + strand, within H281DRAFT_04061 at 162.922 kb on - strand, within H281DRAFT_04061 at 162.922 kb on - strand, within H281DRAFT_04061 at 162.923 kb on + strand, within H281DRAFT_04061 at 162.924 kb on - strand, within H281DRAFT_04061 at 162.987 kb on - strand, within H281DRAFT_04061 at 162.987 kb on - strand, within H281DRAFT_04061 at 162.987 kb on - strand, within H281DRAFT_04061 at 163.019 kb on + strand, within H281DRAFT_04061 at 163.019 kb on + strand, within H281DRAFT_04061 at 163.020 kb on - strand, within H281DRAFT_04061 at 163.020 kb on - strand, within H281DRAFT_04061 at 163.273 kb on - strand at 163.276 kb on + strand, within H281DRAFT_04062 at 163.310 kb on - strand, within H281DRAFT_04062 at 163.434 kb on + strand, within H281DRAFT_04062 at 163.435 kb on - strand, within H281DRAFT_04062 at 163.875 kb on + strand, within H281DRAFT_04062 at 163.970 kb on + strand, within H281DRAFT_04062 at 163.971 kb on - strand, within H281DRAFT_04062 at 164.046 kb on + strand at 164.056 kb on + strand at 164.056 kb on + strand at 164.056 kb on + strand at 164.057 kb on - strand at 164.057 kb on - strand at 164.057 kb on - strand at 164.057 kb on - strand at 164.079 kb on + strand at 164.079 kb on + strand at 164.079 kb on + strand at 164.080 kb on - strand at 164.106 kb on - strand at 164.125 kb on + strand at 164.125 kb on + strand at 164.126 kb on - strand at 164.133 kb on + strand at 164.134 kb on - strand at 164.134 kb on - strand at 164.143 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 161,001 + H281DRAFT_04059 0.73 +1.5 161,001 + H281DRAFT_04059 0.73 +0.5 161,001 + H281DRAFT_04059 0.73 -0.1 161,002 - H281DRAFT_04059 0.73 +0.6 161,023 - H281DRAFT_04059 0.76 +0.5 161,149 - +0.0 161,219 + +1.0 161,522 + H281DRAFT_04060 0.42 +1.3 161,522 + H281DRAFT_04060 0.42 +0.6 161,523 - H281DRAFT_04060 0.42 +0.5 161,532 - H281DRAFT_04060 0.43 +0.6 161,549 + H281DRAFT_04060 0.45 -0.8 161,715 + H281DRAFT_04060 0.67 +0.7 161,725 - H281DRAFT_04060 0.68 +1.0 161,725 - H281DRAFT_04060 0.68 +1.2 161,744 + H281DRAFT_04060 0.71 +0.3 161,745 - H281DRAFT_04060 0.71 +0.6 161,745 - H281DRAFT_04060 0.71 +0.3 161,762 + H281DRAFT_04060 0.73 +1.1 161,804 + H281DRAFT_04060 0.78 +0.6 161,805 - H281DRAFT_04060 0.79 -0.4 161,815 - H281DRAFT_04060 0.80 +0.5 161,962 - +0.9 162,110 + H281DRAFT_04061 0.10 +1.0 162,111 - H281DRAFT_04061 0.10 +0.7 162,399 + H281DRAFT_04061 0.35 +1.0 162,530 + H281DRAFT_04061 0.46 +0.6 162,531 - H281DRAFT_04061 0.46 +0.8 162,533 + H281DRAFT_04061 0.46 +0.6 162,533 + H281DRAFT_04061 0.46 +0.9 162,534 - H281DRAFT_04061 0.47 +1.1 162,536 + H281DRAFT_04061 0.47 +0.7 162,536 + H281DRAFT_04061 0.47 -0.2 162,536 + H281DRAFT_04061 0.47 +1.6 162,537 - H281DRAFT_04061 0.47 +1.4 162,537 - H281DRAFT_04061 0.47 +0.5 162,542 + H281DRAFT_04061 0.47 +1.3 162,543 - H281DRAFT_04061 0.47 +0.9 162,722 + H281DRAFT_04061 0.63 +0.6 162,722 + H281DRAFT_04061 0.63 +1.1 162,757 + H281DRAFT_04061 0.66 +0.8 162,895 - H281DRAFT_04061 0.77 +0.9 162,921 + H281DRAFT_04061 0.80 +0.1 162,922 - H281DRAFT_04061 0.80 +0.6 162,922 - H281DRAFT_04061 0.80 +0.9 162,923 + H281DRAFT_04061 0.80 +0.2 162,924 - H281DRAFT_04061 0.80 +0.9 162,987 - H281DRAFT_04061 0.85 +0.9 162,987 - H281DRAFT_04061 0.85 +1.1 162,987 - H281DRAFT_04061 0.85 +0.9 163,019 + H281DRAFT_04061 0.88 -0.1 163,019 + H281DRAFT_04061 0.88 +0.7 163,020 - H281DRAFT_04061 0.88 +1.4 163,020 - H281DRAFT_04061 0.88 +0.8 163,273 - -0.0 163,276 + H281DRAFT_04062 0.10 +1.8 163,310 - H281DRAFT_04062 0.14 +0.8 163,434 + H281DRAFT_04062 0.27 +0.5 163,435 - H281DRAFT_04062 0.27 +0.0 163,875 + H281DRAFT_04062 0.73 -0.2 163,970 + H281DRAFT_04062 0.83 +0.7 163,971 - H281DRAFT_04062 0.83 +0.6 164,046 + +0.6 164,056 + +0.5 164,056 + +0.6 164,056 + +0.4 164,057 - +0.6 164,057 - +1.0 164,057 - +0.7 164,057 - +0.7 164,079 + +1.3 164,079 + +0.4 164,079 + +1.5 164,080 - -0.6 164,106 - +0.4 164,125 + +0.9 164,125 + +1.5 164,126 - +0.7 164,133 + +0.2 164,134 - +0.7 164,134 - +0.3 164,143 + +0.2
Or see this region's nucleotide sequence