Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03742 and H281DRAFT_03743 are separated by 191 nucleotides H281DRAFT_03743 and H281DRAFT_03744 are separated by 342 nucleotides H281DRAFT_03744 and H281DRAFT_03745 are separated by 100 nucleotides
H281DRAFT_03742: H281DRAFT_03742 - Sugar phosphate permease, at 257,766 to 259,079
_03742
H281DRAFT_03743: H281DRAFT_03743 - hypothetical protein, at 259,271 to 260,077
_03743
H281DRAFT_03744: H281DRAFT_03744 - Uncharacterized conserved protein, DUF1330 family, at 260,420 to 260,713
_03744
H281DRAFT_03745: H281DRAFT_03745 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 260,814 to 261,665
_03745
Position (kb) 259
260
261 Strain fitness (log2 ratio) -2
-1
0
1 at 258.378 kb on - strand, within H281DRAFT_03742 at 258.405 kb on + strand, within H281DRAFT_03742 at 258.406 kb on - strand, within H281DRAFT_03742 at 259.156 kb on - strand at 259.581 kb on + strand, within H281DRAFT_03743 at 259.686 kb on - strand, within H281DRAFT_03743 at 259.738 kb on + strand, within H281DRAFT_03743 at 259.790 kb on - strand, within H281DRAFT_03743 at 260.009 kb on + strand at 260.078 kb on - strand at 260.354 kb on - strand at 260.378 kb on + strand at 260.405 kb on + strand at 260.406 kb on - strand at 260.448 kb on - strand at 260.606 kb on + strand, within H281DRAFT_03744 at 260.734 kb on + strand at 260.815 kb on + strand at 260.815 kb on + strand at 260.815 kb on + strand at 261.036 kb on - strand, within H281DRAFT_03745
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 258,378 - H281DRAFT_03742 0.47 +0.2 258,405 + H281DRAFT_03742 0.49 +0.6 258,406 - H281DRAFT_03742 0.49 +0.5 259,156 - -0.2 259,581 + H281DRAFT_03743 0.38 +0.3 259,686 - H281DRAFT_03743 0.51 +0.9 259,738 + H281DRAFT_03743 0.58 +0.7 259,790 - H281DRAFT_03743 0.64 +1.0 260,009 + -2.0 260,078 - -0.0 260,354 - +1.1 260,378 + -0.1 260,405 + +0.1 260,406 - +1.1 260,448 - +0.4 260,606 + H281DRAFT_03744 0.63 -0.5 260,734 + +1.2 260,815 + +0.6 260,815 + -0.9 260,815 + +1.0 261,036 - H281DRAFT_03745 0.26 -0.2
Or see this region's nucleotide sequence