Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02479 and H281DRAFT_02480 are separated by 172 nucleotides H281DRAFT_02480 and H281DRAFT_02481 are separated by 46 nucleotides
H281DRAFT_02479: H281DRAFT_02479 - transcriptional regulator, LysR family, at 50,935 to 51,849
_02479
H281DRAFT_02480: H281DRAFT_02480 - choline-sulfatase, at 52,022 to 53,560
_02480
H281DRAFT_02481: H281DRAFT_02481 - glycine betaine/proline transport system substrate-binding protein, at 53,607 to 54,560
_02481
Position (kb) 52
53
54 Strain fitness (log2 ratio) -1
0
1 at 51.024 kb on - strand at 51.524 kb on + strand, within H281DRAFT_02479 at 51.525 kb on - strand at 51.734 kb on - strand, within H281DRAFT_02479 at 51.862 kb on + strand at 51.862 kb on + strand at 51.863 kb on - strand at 51.978 kb on - strand at 51.981 kb on + strand at 52.005 kb on + strand at 52.005 kb on + strand at 52.042 kb on + strand at 52.091 kb on + strand at 52.449 kb on - strand, within H281DRAFT_02480 at 52.821 kb on - strand, within H281DRAFT_02480 at 52.889 kb on - strand, within H281DRAFT_02480 at 52.940 kb on + strand, within H281DRAFT_02480 at 52.940 kb on + strand, within H281DRAFT_02480 at 52.940 kb on + strand, within H281DRAFT_02480 at 53.235 kb on + strand, within H281DRAFT_02480 at 53.265 kb on - strand, within H281DRAFT_02480 at 53.265 kb on - strand, within H281DRAFT_02480 at 53.492 kb on + strand at 53.577 kb on + strand at 53.578 kb on - strand at 53.639 kb on + strand at 53.786 kb on + strand, within H281DRAFT_02481 at 53.823 kb on + strand, within H281DRAFT_02481 at 54.048 kb on + strand, within H281DRAFT_02481 at 54.328 kb on - strand, within H281DRAFT_02481 at 54.400 kb on + strand, within H281DRAFT_02481 at 54.400 kb on + strand, within H281DRAFT_02481
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 51,024 - -0.5 51,524 + H281DRAFT_02479 0.64 -0.4 51,525 - -1.0 51,734 - H281DRAFT_02479 0.87 +0.4 51,862 + +0.1 51,862 + -0.8 51,863 - -0.3 51,978 - -0.2 51,981 + -0.2 52,005 + -0.0 52,005 + -0.0 52,042 + -0.3 52,091 + +0.1 52,449 - H281DRAFT_02480 0.28 +0.2 52,821 - H281DRAFT_02480 0.52 -0.3 52,889 - H281DRAFT_02480 0.56 -0.2 52,940 + H281DRAFT_02480 0.60 -0.7 52,940 + H281DRAFT_02480 0.60 -0.1 52,940 + H281DRAFT_02480 0.60 -0.1 53,235 + H281DRAFT_02480 0.79 -1.3 53,265 - H281DRAFT_02480 0.81 -0.1 53,265 - H281DRAFT_02480 0.81 -0.1 53,492 + +0.3 53,577 + -0.5 53,578 - -0.1 53,639 + +0.0 53,786 + H281DRAFT_02481 0.19 +0.3 53,823 + H281DRAFT_02481 0.23 -0.9 54,048 + H281DRAFT_02481 0.46 -0.0 54,328 - H281DRAFT_02481 0.76 +0.3 54,400 + H281DRAFT_02481 0.83 -0.3 54,400 + H281DRAFT_02481 0.83 +0.0
Or see this region's nucleotide sequence