Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01938

Experiment: Phenylacetic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01936 and H281DRAFT_01937 are separated by 60 nucleotidesH281DRAFT_01937 and H281DRAFT_01938 are separated by 52 nucleotidesH281DRAFT_01938 and H281DRAFT_01939 are separated by 47 nucleotides H281DRAFT_01936: H281DRAFT_01936 - outer membrane lipoprotein LolB, at 53,735 to 54,367 _01936 H281DRAFT_01937: H281DRAFT_01937 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 54,428 to 55,309 _01937 H281DRAFT_01938: H281DRAFT_01938 - tRNA_Gln_TTG, at 55,362 to 55,438 _01938 H281DRAFT_01939: H281DRAFT_01939 - ribose-phosphate pyrophosphokinase, at 55,486 to 56,442 _01939 Position (kb) 55 56Strain fitness (log2 ratio) -1 0 1at 54.365 kb on + strandat 54.365 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Phenylacetic (C)
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54,365 + -0.8
54,365 + +0.0

Or see this region's nucleotide sequence