Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00915 and H281DRAFT_00916 are separated by 183 nucleotides H281DRAFT_00916 and H281DRAFT_00917 are separated by 126 nucleotides
H281DRAFT_00915: H281DRAFT_00915 - fatty-acyl-CoA synthase, at 1,016,948 to 1,018,633
_00915
H281DRAFT_00916: H281DRAFT_00916 - short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase, at 1,018,817 to 1,020,901
_00916
H281DRAFT_00917: H281DRAFT_00917 - acetyl-CoA C-acetyltransferase, at 1,021,028 to 1,022,206
_00917
Position (kb)
1018
1019
1020
1021 Strain fitness (log2 ratio)
-1
0
1 at 1017.908 kb on + strand, within H281DRAFT_00915 at 1017.915 kb on + strand, within H281DRAFT_00915 at 1017.915 kb on + strand, within H281DRAFT_00915 at 1018.046 kb on + strand, within H281DRAFT_00915 at 1018.058 kb on - strand, within H281DRAFT_00915 at 1018.121 kb on + strand, within H281DRAFT_00915 at 1018.121 kb on + strand, within H281DRAFT_00915 at 1018.122 kb on - strand, within H281DRAFT_00915 at 1018.214 kb on - strand, within H281DRAFT_00915 at 1018.442 kb on + strand, within H281DRAFT_00915 at 1018.829 kb on + strand at 1019.139 kb on + strand, within H281DRAFT_00916 at 1019.471 kb on - strand, within H281DRAFT_00916 at 1019.471 kb on - strand, within H281DRAFT_00916 at 1019.678 kb on - strand, within H281DRAFT_00916 at 1020.272 kb on + strand, within H281DRAFT_00916 at 1020.272 kb on + strand, within H281DRAFT_00916 at 1020.422 kb on + strand, within H281DRAFT_00916 at 1020.579 kb on - strand at 1020.719 kb on + strand at 1020.720 kb on - strand at 1021.010 kb on + strand at 1021.011 kb on - strand at 1021.041 kb on + strand at 1021.048 kb on - strand at 1021.129 kb on - strand at 1021.182 kb on + strand, within H281DRAFT_00917 at 1021.182 kb on + strand, within H281DRAFT_00917 at 1021.182 kb on + strand, within H281DRAFT_00917 at 1021.502 kb on + strand, within H281DRAFT_00917 at 1021.650 kb on - strand, within H281DRAFT_00917
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 1,017,908 + H281DRAFT_00915 0.57 -0.1 1,017,915 + H281DRAFT_00915 0.57 +0.3 1,017,915 + H281DRAFT_00915 0.57 -0.6 1,018,046 + H281DRAFT_00915 0.65 -0.1 1,018,058 - H281DRAFT_00915 0.66 -0.1 1,018,121 + H281DRAFT_00915 0.70 +0.2 1,018,121 + H281DRAFT_00915 0.70 -0.5 1,018,122 - H281DRAFT_00915 0.70 -0.5 1,018,214 - H281DRAFT_00915 0.75 -0.3 1,018,442 + H281DRAFT_00915 0.89 -1.2 1,018,829 + -0.1 1,019,139 + H281DRAFT_00916 0.15 -1.1 1,019,471 - H281DRAFT_00916 0.31 +0.3 1,019,471 - H281DRAFT_00916 0.31 +0.3 1,019,678 - H281DRAFT_00916 0.41 -0.7 1,020,272 + H281DRAFT_00916 0.70 -0.5 1,020,272 + H281DRAFT_00916 0.70 -0.3 1,020,422 + H281DRAFT_00916 0.77 +0.5 1,020,579 - -0.8 1,020,719 + +0.2 1,020,720 - +0.6 1,021,010 + +0.3 1,021,011 - +0.3 1,021,041 + +0.5 1,021,048 - -0.4 1,021,129 - +0.1 1,021,182 + H281DRAFT_00917 0.13 +0.2 1,021,182 + H281DRAFT_00917 0.13 +0.3 1,021,182 + H281DRAFT_00917 0.13 +0.6 1,021,502 + H281DRAFT_00917 0.40 -0.2 1,021,650 - H281DRAFT_00917 0.53 +0.8
Or see this region's nucleotide sequence