Experiment: Ethanol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3203 and HP15_3204 are separated by 26 nucleotides HP15_3204 and HP15_3205 are separated by 136 nucleotides HP15_3205 and HP15_3206 are separated by 6 nucleotides
HP15_3203: HP15_3203 - proline aminopeptidase P II, at 3,355,964 to 3,357,283
_3203
HP15_3204: HP15_3204 - yecA family protein, at 3,357,310 to 3,357,909
_3204
HP15_3205: HP15_3205 - conserved hypothetical protein, secreted, at 3,358,046 to 3,358,609
_3205
HP15_3206: HP15_3206 - conserved hypothetical protein, membrane, at 3,358,616 to 3,359,248
_3206
Position (kb)
3357
3358 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3356.430 kb on + strand, within HP15_3203 at 3356.517 kb on - strand, within HP15_3203 at 3356.533 kb on - strand, within HP15_3203 at 3356.540 kb on + strand, within HP15_3203 at 3356.600 kb on - strand, within HP15_3203 at 3356.606 kb on - strand, within HP15_3203 at 3356.606 kb on - strand, within HP15_3203 at 3356.606 kb on - strand, within HP15_3203 at 3356.620 kb on + strand, within HP15_3203 at 3356.628 kb on - strand, within HP15_3203 at 3356.651 kb on - strand, within HP15_3203 at 3356.651 kb on - strand, within HP15_3203 at 3356.716 kb on + strand, within HP15_3203 at 3356.860 kb on - strand, within HP15_3203 at 3356.905 kb on - strand, within HP15_3203 at 3357.045 kb on + strand, within HP15_3203 at 3357.107 kb on - strand, within HP15_3203 at 3357.220 kb on - strand at 3357.308 kb on + strand at 3357.352 kb on + strand at 3357.565 kb on + strand, within HP15_3204 at 3357.593 kb on - strand, within HP15_3204 at 3357.648 kb on - strand, within HP15_3204 at 3357.832 kb on + strand, within HP15_3204 at 3357.943 kb on - strand at 3357.964 kb on + strand at 3357.972 kb on - strand at 3358.145 kb on + strand, within HP15_3205 at 3358.200 kb on - strand, within HP15_3205 at 3358.264 kb on + strand, within HP15_3205 at 3358.292 kb on - strand, within HP15_3205 at 3358.292 kb on - strand, within HP15_3205 at 3358.383 kb on + strand, within HP15_3205 at 3358.445 kb on + strand, within HP15_3205 at 3358.453 kb on - strand, within HP15_3205 at 3358.460 kb on + strand, within HP15_3205 at 3358.463 kb on - strand, within HP15_3205 at 3358.478 kb on - strand, within HP15_3205 at 3358.587 kb on + strand at 3358.630 kb on + strand at 3358.630 kb on + strand at 3358.638 kb on - strand at 3358.638 kb on - strand at 3358.717 kb on - strand, within HP15_3206 at 3358.795 kb on + strand, within HP15_3206
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol remove 3,356,430 + HP15_3203 0.35 -1.2 3,356,517 - HP15_3203 0.42 -1.4 3,356,533 - HP15_3203 0.43 -3.0 3,356,540 + HP15_3203 0.44 -3.5 3,356,600 - HP15_3203 0.48 -1.4 3,356,606 - HP15_3203 0.49 -3.8 3,356,606 - HP15_3203 0.49 -1.2 3,356,606 - HP15_3203 0.49 -1.2 3,356,620 + HP15_3203 0.50 -4.1 3,356,628 - HP15_3203 0.50 -2.5 3,356,651 - HP15_3203 0.52 -3.6 3,356,651 - HP15_3203 0.52 -0.2 3,356,716 + HP15_3203 0.57 -3.0 3,356,860 - HP15_3203 0.68 -3.0 3,356,905 - HP15_3203 0.71 -2.2 3,357,045 + HP15_3203 0.82 -1.2 3,357,107 - HP15_3203 0.87 -2.1 3,357,220 - -2.5 3,357,308 + -0.2 3,357,352 + -2.2 3,357,565 + HP15_3204 0.42 -0.0 3,357,593 - HP15_3204 0.47 -2.7 3,357,648 - HP15_3204 0.56 -1.0 3,357,832 + HP15_3204 0.87 -0.4 3,357,943 - +0.1 3,357,964 + -1.7 3,357,972 - -0.4 3,358,145 + HP15_3205 0.18 +0.7 3,358,200 - HP15_3205 0.27 -0.1 3,358,264 + HP15_3205 0.39 +0.6 3,358,292 - HP15_3205 0.44 +0.0 3,358,292 - HP15_3205 0.44 +0.5 3,358,383 + HP15_3205 0.60 +0.0 3,358,445 + HP15_3205 0.71 +0.5 3,358,453 - HP15_3205 0.72 +0.8 3,358,460 + HP15_3205 0.73 +0.6 3,358,463 - HP15_3205 0.74 -0.2 3,358,478 - HP15_3205 0.77 -0.2 3,358,587 + +0.7 3,358,630 + +0.1 3,358,630 + -0.4 3,358,638 - +0.3 3,358,638 - +0.1 3,358,717 - HP15_3206 0.16 -0.3 3,358,795 + HP15_3206 0.28 -0.7
Or see this region's nucleotide sequence