Strain Fitness in Marinobacter adhaerens HP15 around HP15_1518

Experiment: Ethanol

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntHP15_1516 and HP15_1517 are separated by 478 nucleotidesHP15_1517 and HP15_1518 overlap by 10 nucleotidesHP15_1518 and HP15_1519 are separated by 3 nucleotides HP15_1516: HP15_1516 - type II citrate synthase, at 1,595,737 to 1,597,011 _1516 HP15_1517: HP15_1517 - succinate dehydrogenase, cytochrome b560 subunit, at 1,597,490 to 1,597,867 _1517 HP15_1518: HP15_1518 - succinate dehydrogenase, hydrophobic membrane anchor, at 1,597,858 to 1,598,205 _1518 HP15_1519: HP15_1519 - succinate dehydrogenase flavoprotein subunit-like protein, at 1,598,209 to 1,599,981 _1519 Position (kb) 1597 1598 1599Strain fitness (log2 ratio) -1 0 1at 1597.224 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ethanol
remove
1,597,224 + -0.5

Or see this region's nucleotide sequence