Experiment: Ethanol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1355 and HP15_1356 overlap by 4 nucleotides HP15_1356 and HP15_1357 are separated by 40 nucleotides
HP15_1355: HP15_1355 - cell division protein FtsH, at 1,424,465 to 1,426,378
_1355
HP15_1356: HP15_1356 - conserved hypothetical protein, at 1,426,375 to 1,426,623
_1356
HP15_1357: HP15_1357 - gamma-glutamyltranspeptidase periplasmic precursor, at 1,426,664 to 1,428,427
_1357
Position (kb)
1426
1427 Strain fitness (log2 ratio)
-1
0
1
2 at 1425.483 kb on - strand, within HP15_1355 at 1425.483 kb on - strand, within HP15_1355 at 1425.584 kb on - strand, within HP15_1355 at 1425.667 kb on - strand, within HP15_1355 at 1425.667 kb on - strand, within HP15_1355 at 1425.672 kb on - strand, within HP15_1355 at 1425.692 kb on + strand, within HP15_1355 at 1425.836 kb on - strand, within HP15_1355 at 1425.909 kb on + strand, within HP15_1355 at 1425.975 kb on + strand, within HP15_1355 at 1425.980 kb on + strand, within HP15_1355 at 1425.993 kb on - strand, within HP15_1355 at 1426.421 kb on + strand, within HP15_1356 at 1426.469 kb on + strand, within HP15_1356 at 1426.469 kb on + strand, within HP15_1356 at 1426.477 kb on - strand, within HP15_1356 at 1426.524 kb on + strand, within HP15_1356 at 1426.532 kb on - strand, within HP15_1356 at 1426.534 kb on + strand, within HP15_1356 at 1426.534 kb on + strand, within HP15_1356 at 1426.547 kb on - strand, within HP15_1356 at 1427.089 kb on - strand, within HP15_1357 at 1427.181 kb on + strand, within HP15_1357 at 1427.189 kb on - strand, within HP15_1357 at 1427.195 kb on - strand, within HP15_1357 at 1427.208 kb on + strand, within HP15_1357 at 1427.216 kb on - strand, within HP15_1357 at 1427.236 kb on + strand, within HP15_1357 at 1427.244 kb on - strand, within HP15_1357 at 1427.287 kb on + strand, within HP15_1357 at 1427.287 kb on + strand, within HP15_1357 at 1427.397 kb on - strand, within HP15_1357 at 1427.406 kb on - strand, within HP15_1357 at 1427.414 kb on + strand, within HP15_1357 at 1427.525 kb on + strand, within HP15_1357 at 1427.609 kb on + strand, within HP15_1357
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol remove 1,425,483 - HP15_1355 0.53 -1.7 1,425,483 - HP15_1355 0.53 -0.2 1,425,584 - HP15_1355 0.58 -1.2 1,425,667 - HP15_1355 0.63 +0.6 1,425,667 - HP15_1355 0.63 +0.9 1,425,672 - HP15_1355 0.63 -0.2 1,425,692 + HP15_1355 0.64 +1.0 1,425,836 - HP15_1355 0.72 +0.3 1,425,909 + HP15_1355 0.75 -0.2 1,425,975 + HP15_1355 0.79 -0.4 1,425,980 + HP15_1355 0.79 +0.5 1,425,993 - HP15_1355 0.80 -0.3 1,426,421 + HP15_1356 0.18 -0.2 1,426,469 + HP15_1356 0.38 -0.3 1,426,469 + HP15_1356 0.38 +0.4 1,426,477 - HP15_1356 0.41 -0.6 1,426,524 + HP15_1356 0.60 +0.2 1,426,532 - HP15_1356 0.63 -0.2 1,426,534 + HP15_1356 0.64 +1.3 1,426,534 + HP15_1356 0.64 +2.4 1,426,547 - HP15_1356 0.69 +0.8 1,427,089 - HP15_1357 0.24 +0.7 1,427,181 + HP15_1357 0.29 +0.9 1,427,189 - HP15_1357 0.30 -0.4 1,427,195 - HP15_1357 0.30 -0.6 1,427,208 + HP15_1357 0.31 +0.3 1,427,216 - HP15_1357 0.31 +1.0 1,427,236 + HP15_1357 0.32 -0.0 1,427,244 - HP15_1357 0.33 -0.6 1,427,287 + HP15_1357 0.35 +2.2 1,427,287 + HP15_1357 0.35 +0.3 1,427,397 - HP15_1357 0.42 +1.3 1,427,406 - HP15_1357 0.42 +0.1 1,427,414 + HP15_1357 0.43 -0.7 1,427,525 + HP15_1357 0.49 -0.8 1,427,609 + HP15_1357 0.54 -0.4
Or see this region's nucleotide sequence