Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS20850

Experiment: reconstituted MRS with Avantafiber 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Avantafiber 0.5 %w/v
1,080,264	+		BBR_RS14735	0.13	-0.8
1,080,264	+		BBR_RS14735	0.13	+0.7
1,080,298	+		BBR_RS14735	0.20	+2.6
1,080,298	-		BBR_RS14735	0.20	+0.2
1,080,316	+		BBR_RS14735	0.23	+0.6
1,080,349	+		BBR_RS14735	0.30	-0.8
1,080,384	-		BBR_RS14735	0.37	+0.7
1,080,453	-		BBR_RS14735	0.51	+0.5
1,080,461	+		BBR_RS14735	0.53	-1.4
1,080,505	+		BBR_RS14735	0.62	-0.8
1,080,513	-		BBR_RS14735	0.64	+0.5
1,080,559	+		BBR_RS14735	0.73	+0.2
1,080,559	+		BBR_RS14735	0.73	-0.9
1,080,559	+		BBR_RS14735	0.73	+0.0
1,080,559	+		BBR_RS14735	0.73	+0.4
1,080,567	-		BBR_RS14735	0.75	+0.8
1,080,567	-		BBR_RS14735	0.75	-0.6
1,080,567	-		BBR_RS14735	0.75	-0.1
1,080,567	-		BBR_RS14735	0.75	-0.8
1,080,567	-		BBR_RS14735	0.75	+0.2
1,080,569	+		BBR_RS14735	0.75	-0.2
1,080,569	+		BBR_RS14735	0.75	-0.6
1,080,569	+		BBR_RS14735	0.75	+0.4
1,080,569	+		BBR_RS14735	0.75	-0.3
1,080,577	-		BBR_RS14735	0.77	-1.3
1,080,577	-		BBR_RS14735	0.77	-0.8
1,080,577	-		BBR_RS14735	0.77	-0.4
1,080,577	-		BBR_RS14735	0.77	+0.1
1,080,596	-		BBR_RS14735	0.81	-0.4
1,080,674	+				+0.5
1,080,864	-		BBR_RS20850	0.75	-2.9
1,080,901	+				-0.6
1,080,905	+				-1.3
1,080,914	+				+0.2
1,080,927	-				+0.7
1,080,932	-				-0.9
1,080,982	-				-0.8
1,081,092	-				-0.4
1,081,189	+		BBR_RS14740	0.23	+0.0
1,081,223	+		BBR_RS14740	0.33	-0.0
1,081,231	-		BBR_RS14740	0.35	+0.4
1,081,268	+		BBR_RS14740	0.45	-0.0
1,081,271	-		BBR_RS14740	0.46	-0.7
1,081,276	-		BBR_RS14740	0.47	+0.7
1,081,348	+		BBR_RS14740	0.67	-0.3
1,081,348	+		BBR_RS14740	0.67	+0.4
1,081,395	-		BBR_RS14740	0.80	+0.1
1,081,421	+		BBR_RS14740	0.87	-1.4
1,081,429	-		BBR_RS14740	0.89	+0.5
1,081,544	+				+0.5
1,081,558	-				+1.2
1,081,564	-				-0.6
1,081,609	+				+0.5
1,081,661	-				-0.4
1,081,731	+				+0.2
1,081,739	+				+0.5
1,081,739	+				+0.5
1,081,768	+				+1.0
1,081,776	-		BBR_RS20855	0.10	+0.3
1,081,791	+		BBR_RS20855	0.16	+0.1
1,081,846	-		BBR_RS20855	0.35	+0.2
1,081,865	+		BBR_RS20855	0.42	-0.4
1,081,871	-		BBR_RS20855	0.44	-0.9
1,081,916	+		BBR_RS20855	0.60	+1.0