Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05934 and H281DRAFT_05935 are separated by 285 nucleotides H281DRAFT_05935 and H281DRAFT_05936 are separated by 132 nucleotides
H281DRAFT_05934: H281DRAFT_05934 - Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains, at 72,066 to 72,935
_05934
H281DRAFT_05935: H281DRAFT_05935 - glutamine--fructose-6-phosphate transaminase, at 73,221 to 75,050
_05935
H281DRAFT_05936: H281DRAFT_05936 - hypothetical protein, at 75,183 to 76,709
_05936
Position (kb) 73
74
75
76 Strain fitness (log2 ratio) -1
0
1 at 72.622 kb on - strand, within H281DRAFT_05934 at 72.736 kb on - strand, within H281DRAFT_05934 at 72.931 kb on + strand at 73.174 kb on + strand at 73.175 kb on - strand at 73.175 kb on - strand at 73.234 kb on + strand at 73.434 kb on - strand, within H281DRAFT_05935 at 73.561 kb on + strand at 73.792 kb on - strand, within H281DRAFT_05935 at 74.060 kb on - strand, within H281DRAFT_05935 at 74.241 kb on - strand, within H281DRAFT_05935 at 74.245 kb on + strand, within H281DRAFT_05935 at 74.699 kb on - strand, within H281DRAFT_05935 at 74.773 kb on + strand at 74.854 kb on - strand, within H281DRAFT_05935 at 74.905 kb on + strand at 75.193 kb on - strand at 75.474 kb on + strand, within H281DRAFT_05936 at 75.633 kb on + strand, within H281DRAFT_05936 at 75.790 kb on - strand, within H281DRAFT_05936
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 72,622 - H281DRAFT_05934 0.64 -1.0 72,736 - H281DRAFT_05934 0.77 -0.0 72,931 + +0.3 73,174 + +0.0 73,175 - -0.8 73,175 - +0.0 73,234 + -0.5 73,434 - H281DRAFT_05935 0.12 -0.4 73,561 + -0.5 73,792 - H281DRAFT_05935 0.31 +1.3 74,060 - H281DRAFT_05935 0.46 +0.3 74,241 - H281DRAFT_05935 0.56 +0.3 74,245 + H281DRAFT_05935 0.56 -0.2 74,699 - H281DRAFT_05935 0.81 +0.7 74,773 + +0.7 74,854 - H281DRAFT_05935 0.89 +0.3 74,905 + +0.7 75,193 - -0.3 75,474 + H281DRAFT_05936 0.19 +0.3 75,633 + H281DRAFT_05936 0.29 +0.4 75,790 - H281DRAFT_05936 0.40 +1.5
Or see this region's nucleotide sequence