Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05911 and H281DRAFT_05912 are separated by 144 nucleotides H281DRAFT_05912 and H281DRAFT_05913 are separated by 116 nucleotides H281DRAFT_05913 and H281DRAFT_05914 are separated by 505 nucleotides
H281DRAFT_05911: H281DRAFT_05911 - hypothetical protein, at 45,413 to 45,727
_05911
H281DRAFT_05912: H281DRAFT_05912 - transcriptional regulator, TetR family, at 45,872 to 46,453
_05912
H281DRAFT_05913: H281DRAFT_05913 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 46,570 to 47,559
_05913
H281DRAFT_05914: H281DRAFT_05914 - hypothetical protein, at 48,065 to 48,724
_05914
Position (kb) 46
47
48 Strain fitness (log2 ratio) -1
0
1 at 45.583 kb on + strand, within H281DRAFT_05911 at 45.720 kb on + strand at 45.877 kb on + strand at 45.878 kb on - strand at 46.074 kb on + strand, within H281DRAFT_05912 at 46.207 kb on + strand, within H281DRAFT_05912 at 46.294 kb on - strand, within H281DRAFT_05912 at 46.551 kb on + strand at 46.552 kb on - strand at 46.552 kb on - strand at 47.101 kb on + strand, within H281DRAFT_05913 at 47.119 kb on + strand, within H281DRAFT_05913 at 47.189 kb on + strand, within H281DRAFT_05913 at 47.263 kb on - strand, within H281DRAFT_05913 at 47.263 kb on - strand, within H281DRAFT_05913 at 47.265 kb on + strand, within H281DRAFT_05913 at 47.265 kb on + strand, within H281DRAFT_05913 at 47.265 kb on + strand, within H281DRAFT_05913 at 47.266 kb on - strand, within H281DRAFT_05913 at 47.266 kb on - strand, within H281DRAFT_05913 at 47.476 kb on + strand at 47.476 kb on + strand at 47.531 kb on + strand at 47.631 kb on - strand at 47.782 kb on + strand at 48.076 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 45,583 + H281DRAFT_05911 0.54 -0.9 45,720 + +0.1 45,877 + +0.3 45,878 - -1.4 46,074 + H281DRAFT_05912 0.35 +1.1 46,207 + H281DRAFT_05912 0.58 -0.6 46,294 - H281DRAFT_05912 0.73 +0.8 46,551 + -0.2 46,552 - +1.7 46,552 - +0.2 47,101 + H281DRAFT_05913 0.54 +1.1 47,119 + H281DRAFT_05913 0.55 +0.5 47,189 + H281DRAFT_05913 0.63 -0.1 47,263 - H281DRAFT_05913 0.70 -0.3 47,263 - H281DRAFT_05913 0.70 +0.9 47,265 + H281DRAFT_05913 0.70 +0.7 47,265 + H281DRAFT_05913 0.70 -0.2 47,265 + H281DRAFT_05913 0.70 +0.1 47,266 - H281DRAFT_05913 0.70 +0.7 47,266 - H281DRAFT_05913 0.70 +1.3 47,476 + -0.7 47,476 + -0.6 47,531 + +0.3 47,631 - -0.0 47,782 + -0.5 48,076 + +0.4
Or see this region's nucleotide sequence