Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05845 and H281DRAFT_05846 are separated by 277 nucleotides H281DRAFT_05846 and H281DRAFT_05847 are separated by 155 nucleotides
H281DRAFT_05845: H281DRAFT_05845 - Predicted arabinose efflux permease, MFS family, at 121,393 to 122,625
_05845
H281DRAFT_05846: H281DRAFT_05846 - malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 122,903 to 125,185
_05846
H281DRAFT_05847: H281DRAFT_05847 - indolepyruvate ferredoxin oxidoreductase, at 125,341 to 128,940
_05847
Position (kb)
122
123
124
125
126 Strain fitness (log2 ratio)
-2
-1
0
1 at 122.090 kb on + strand, within H281DRAFT_05845 at 122.090 kb on + strand, within H281DRAFT_05845 at 122.090 kb on + strand, within H281DRAFT_05845 at 122.091 kb on - strand, within H281DRAFT_05845 at 122.114 kb on - strand, within H281DRAFT_05845 at 122.117 kb on - strand, within H281DRAFT_05845 at 122.143 kb on + strand, within H281DRAFT_05845 at 122.143 kb on + strand, within H281DRAFT_05845 at 122.143 kb on + strand, within H281DRAFT_05845 at 122.144 kb on - strand, within H281DRAFT_05845 at 122.164 kb on + strand, within H281DRAFT_05845 at 122.241 kb on - strand, within H281DRAFT_05845 at 122.281 kb on + strand, within H281DRAFT_05845 at 122.281 kb on + strand, within H281DRAFT_05845 at 122.282 kb on - strand, within H281DRAFT_05845 at 122.282 kb on - strand, within H281DRAFT_05845 at 122.314 kb on + strand, within H281DRAFT_05845 at 122.521 kb on + strand at 122.522 kb on - strand at 122.561 kb on - strand at 122.561 kb on - strand at 122.561 kb on - strand at 122.565 kb on - strand at 122.730 kb on + strand at 122.730 kb on + strand at 122.730 kb on + strand at 122.731 kb on - strand at 122.731 kb on - strand at 122.731 kb on - strand at 122.731 kb on - strand at 122.731 kb on - strand at 122.736 kb on - strand at 122.748 kb on + strand at 122.840 kb on - strand at 122.884 kb on + strand at 122.885 kb on - strand at 122.885 kb on - strand at 122.885 kb on - strand at 122.937 kb on - strand at 122.971 kb on + strand at 123.018 kb on - strand at 123.044 kb on - strand at 123.053 kb on + strand at 123.054 kb on - strand at 123.080 kb on + strand at 123.080 kb on + strand at 123.080 kb on + strand at 123.081 kb on - strand at 123.081 kb on - strand at 123.081 kb on - strand at 123.335 kb on + strand, within H281DRAFT_05846 at 123.336 kb on - strand, within H281DRAFT_05846 at 123.336 kb on - strand, within H281DRAFT_05846 at 123.361 kb on + strand, within H281DRAFT_05846 at 123.361 kb on + strand, within H281DRAFT_05846 at 123.362 kb on - strand, within H281DRAFT_05846 at 123.441 kb on + strand, within H281DRAFT_05846 at 123.441 kb on + strand, within H281DRAFT_05846 at 123.442 kb on - strand, within H281DRAFT_05846 at 123.578 kb on + strand, within H281DRAFT_05846 at 123.578 kb on + strand, within H281DRAFT_05846 at 123.579 kb on - strand, within H281DRAFT_05846 at 123.579 kb on - strand, within H281DRAFT_05846 at 123.579 kb on - strand, within H281DRAFT_05846 at 123.998 kb on + strand, within H281DRAFT_05846 at 123.998 kb on + strand, within H281DRAFT_05846 at 124.031 kb on + strand, within H281DRAFT_05846 at 124.146 kb on - strand, within H281DRAFT_05846 at 124.419 kb on - strand, within H281DRAFT_05846 at 124.690 kb on + strand, within H281DRAFT_05846 at 124.694 kb on + strand, within H281DRAFT_05846 at 124.694 kb on + strand, within H281DRAFT_05846 at 124.694 kb on + strand, within H281DRAFT_05846 at 124.694 kb on + strand, within H281DRAFT_05846 at 124.695 kb on - strand, within H281DRAFT_05846 at 124.695 kb on - strand, within H281DRAFT_05846 at 124.695 kb on - strand, within H281DRAFT_05846 at 125.018 kb on + strand at 125.019 kb on - strand at 125.019 kb on - strand at 125.184 kb on - strand at 125.184 kb on - strand at 125.666 kb on + strand at 125.666 kb on + strand at 125.667 kb on - strand at 125.667 kb on - strand at 125.667 kb on - strand at 125.667 kb on - strand at 125.730 kb on + strand, within H281DRAFT_05847 at 125.731 kb on - strand, within H281DRAFT_05847 at 125.792 kb on + strand, within H281DRAFT_05847 at 125.810 kb on + strand, within H281DRAFT_05847 at 125.810 kb on + strand, within H281DRAFT_05847 at 125.811 kb on - strand, within H281DRAFT_05847 at 125.811 kb on - strand, within H281DRAFT_05847 at 125.823 kb on - strand, within H281DRAFT_05847 at 125.945 kb on + strand, within H281DRAFT_05847 at 125.946 kb on - strand, within H281DRAFT_05847 at 125.972 kb on + strand, within H281DRAFT_05847 at 126.015 kb on + strand, within H281DRAFT_05847 at 126.015 kb on + strand, within H281DRAFT_05847 at 126.016 kb on - strand, within H281DRAFT_05847 at 126.081 kb on - strand, within H281DRAFT_05847 at 126.081 kb on - strand, within H281DRAFT_05847 at 126.171 kb on + strand, within H281DRAFT_05847
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 122,090 + H281DRAFT_05845 0.57 -0.1 122,090 + H281DRAFT_05845 0.57 -0.1 122,090 + H281DRAFT_05845 0.57 +0.2 122,091 - H281DRAFT_05845 0.57 +0.1 122,114 - H281DRAFT_05845 0.58 -0.1 122,117 - H281DRAFT_05845 0.59 +0.3 122,143 + H281DRAFT_05845 0.61 -0.1 122,143 + H281DRAFT_05845 0.61 +0.5 122,143 + H281DRAFT_05845 0.61 +0.2 122,144 - H281DRAFT_05845 0.61 -0.5 122,164 + H281DRAFT_05845 0.63 -0.4 122,241 - H281DRAFT_05845 0.69 +0.2 122,281 + H281DRAFT_05845 0.72 +0.1 122,281 + H281DRAFT_05845 0.72 -0.1 122,282 - H281DRAFT_05845 0.72 -0.3 122,282 - H281DRAFT_05845 0.72 +0.3 122,314 + H281DRAFT_05845 0.75 -1.1 122,521 + +0.2 122,522 - -0.3 122,561 - +0.4 122,561 - +0.5 122,561 - +0.6 122,565 - -0.5 122,730 + +0.3 122,730 + +0.4 122,730 + -0.2 122,731 - -0.2 122,731 - +0.4 122,731 - +0.4 122,731 - +0.1 122,731 - +0.3 122,736 - -0.0 122,748 + +0.7 122,840 - +0.8 122,884 + +0.0 122,885 - +1.0 122,885 - +1.7 122,885 - -0.3 122,937 - +0.1 122,971 + -0.3 123,018 - -0.5 123,044 - -0.1 123,053 + +0.1 123,054 - -0.4 123,080 + -0.0 123,080 + +0.1 123,080 + -0.3 123,081 - -0.6 123,081 - -0.4 123,081 - -0.3 123,335 + H281DRAFT_05846 0.19 -0.9 123,336 - H281DRAFT_05846 0.19 -0.7 123,336 - H281DRAFT_05846 0.19 -1.2 123,361 + H281DRAFT_05846 0.20 +0.0 123,361 + H281DRAFT_05846 0.20 +0.2 123,362 - H281DRAFT_05846 0.20 -0.8 123,441 + H281DRAFT_05846 0.24 -0.2 123,441 + H281DRAFT_05846 0.24 -0.4 123,442 - H281DRAFT_05846 0.24 -2.1 123,578 + H281DRAFT_05846 0.30 -0.5 123,578 + H281DRAFT_05846 0.30 -0.2 123,579 - H281DRAFT_05846 0.30 -0.9 123,579 - H281DRAFT_05846 0.30 +0.9 123,579 - H281DRAFT_05846 0.30 +0.2 123,998 + H281DRAFT_05846 0.48 +0.1 123,998 + H281DRAFT_05846 0.48 -1.0 124,031 + H281DRAFT_05846 0.49 +0.0 124,146 - H281DRAFT_05846 0.54 -0.2 124,419 - H281DRAFT_05846 0.66 -1.8 124,690 + H281DRAFT_05846 0.78 -0.3 124,694 + H281DRAFT_05846 0.78 -0.2 124,694 + H281DRAFT_05846 0.78 -2.1 124,694 + H281DRAFT_05846 0.78 -0.4 124,694 + H281DRAFT_05846 0.78 -0.4 124,695 - H281DRAFT_05846 0.78 -0.2 124,695 - H281DRAFT_05846 0.78 +0.1 124,695 - H281DRAFT_05846 0.78 -0.0 125,018 + -0.8 125,019 - -0.1 125,019 - -0.3 125,184 - +0.6 125,184 - -0.1 125,666 + +0.2 125,666 + -0.1 125,667 - -2.3 125,667 - +0.6 125,667 - +0.5 125,667 - -0.2 125,730 + H281DRAFT_05847 0.11 +0.1 125,731 - H281DRAFT_05847 0.11 -0.7 125,792 + H281DRAFT_05847 0.13 -0.2 125,810 + H281DRAFT_05847 0.13 -0.3 125,810 + H281DRAFT_05847 0.13 -0.4 125,811 - H281DRAFT_05847 0.13 +1.3 125,811 - H281DRAFT_05847 0.13 +0.1 125,823 - H281DRAFT_05847 0.13 -1.5 125,945 + H281DRAFT_05847 0.17 +0.1 125,946 - H281DRAFT_05847 0.17 -0.6 125,972 + H281DRAFT_05847 0.18 +0.2 126,015 + H281DRAFT_05847 0.19 -1.0 126,015 + H281DRAFT_05847 0.19 +0.5 126,016 - H281DRAFT_05847 0.19 -0.2 126,081 - H281DRAFT_05847 0.21 +0.3 126,081 - H281DRAFT_05847 0.21 +0.7 126,171 + H281DRAFT_05847 0.23 -0.0
Or see this region's nucleotide sequence