Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05320 and H281DRAFT_05321 are separated by 125 nucleotides H281DRAFT_05321 and H281DRAFT_05322 overlap by 4 nucleotides H281DRAFT_05322 and H281DRAFT_05323 are separated by 357 nucleotides H281DRAFT_05323 and H281DRAFT_05324 overlap by 4 nucleotides
H281DRAFT_05320: H281DRAFT_05320 - galactarate dehydratase, at 71,056 to 72,645
_05320
H281DRAFT_05321: H281DRAFT_05321 - uronate dehydrogenase, at 72,771 to 73,613
_05321
H281DRAFT_05322: H281DRAFT_05322 - gluconolactonase (EC 3.1.1.17), at 73,610 to 74,563
_05322
H281DRAFT_05323: H281DRAFT_05323 - hypothetical protein, at 74,921 to 75,211
_05323
H281DRAFT_05324: H281DRAFT_05324 - tripartite ATP-independent transporter solute receptor, DctP family, at 75,208 to 76,203
_05324
Position (kb) 73
74
75 Strain fitness (log2 ratio) -2
-1
0
1 at 72.684 kb on + strand at 72.685 kb on - strand at 72.720 kb on + strand at 72.720 kb on + strand at 72.721 kb on - strand at 72.751 kb on + strand at 72.751 kb on + strand at 72.761 kb on + strand at 73.089 kb on + strand, within H281DRAFT_05321 at 73.251 kb on + strand, within H281DRAFT_05321 at 73.254 kb on + strand, within H281DRAFT_05321 at 73.254 kb on + strand, within H281DRAFT_05321 at 73.255 kb on - strand, within H281DRAFT_05321 at 73.255 kb on - strand, within H281DRAFT_05321 at 73.350 kb on + strand, within H281DRAFT_05321 at 73.417 kb on - strand, within H281DRAFT_05321 at 73.582 kb on + strand at 73.715 kb on + strand, within H281DRAFT_05322 at 74.169 kb on - strand, within H281DRAFT_05322 at 74.169 kb on - strand, within H281DRAFT_05322 at 74.319 kb on - strand, within H281DRAFT_05322 at 74.729 kb on - strand at 74.826 kb on + strand at 74.982 kb on - strand, within H281DRAFT_05323 at 74.982 kb on - strand, within H281DRAFT_05323 at 74.982 kb on - strand, within H281DRAFT_05323
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 72,684 + -0.3 72,685 - -0.5 72,720 + +0.5 72,720 + -1.9 72,721 - +0.5 72,751 + +0.2 72,751 + -0.0 72,761 + +0.0 73,089 + H281DRAFT_05321 0.38 -0.4 73,251 + H281DRAFT_05321 0.57 +0.7 73,254 + H281DRAFT_05321 0.57 +0.1 73,254 + H281DRAFT_05321 0.57 +0.4 73,255 - H281DRAFT_05321 0.57 -0.6 73,255 - H281DRAFT_05321 0.57 -0.6 73,350 + H281DRAFT_05321 0.69 -1.0 73,417 - H281DRAFT_05321 0.77 -0.7 73,582 + -0.1 73,715 + H281DRAFT_05322 0.11 +0.6 74,169 - H281DRAFT_05322 0.59 +0.1 74,169 - H281DRAFT_05322 0.59 +0.1 74,319 - H281DRAFT_05322 0.74 +0.1 74,729 - -0.1 74,826 + -0.7 74,982 - H281DRAFT_05323 0.21 -0.7 74,982 - H281DRAFT_05323 0.21 +0.2 74,982 - H281DRAFT_05323 0.21 -0.3
Or see this region's nucleotide sequence