Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05171 and H281DRAFT_05172 are separated by 112 nucleotides H281DRAFT_05172 and H281DRAFT_05173 are separated by 168 nucleotides
H281DRAFT_05171: H281DRAFT_05171 - ATPase components of ABC transporters with duplicated ATPase domains, at 126,010 to 127,602
_05171
H281DRAFT_05172: H281DRAFT_05172 - hypothetical protein, at 127,715 to 128,209
_05172
H281DRAFT_05173: H281DRAFT_05173 - betaine-aldehyde dehydrogenase, at 128,378 to 129,802
_05173
Position (kb) 127
128
129 Strain fitness (log2 ratio) -1
0
1
2 at 126.727 kb on + strand, within H281DRAFT_05171 at 126.727 kb on + strand, within H281DRAFT_05171 at 126.727 kb on + strand, within H281DRAFT_05171 at 126.728 kb on - strand, within H281DRAFT_05171 at 126.728 kb on - strand, within H281DRAFT_05171 at 126.728 kb on - strand at 126.728 kb on - strand, within H281DRAFT_05171 at 127.163 kb on - strand, within H281DRAFT_05171 at 127.180 kb on + strand, within H281DRAFT_05171 at 127.180 kb on + strand, within H281DRAFT_05171 at 127.181 kb on - strand, within H281DRAFT_05171 at 127.181 kb on - strand, within H281DRAFT_05171 at 127.568 kb on - strand at 127.769 kb on + strand, within H281DRAFT_05172 at 127.992 kb on + strand, within H281DRAFT_05172 at 127.993 kb on - strand, within H281DRAFT_05172 at 128.265 kb on + strand at 128.265 kb on + strand at 128.266 kb on - strand at 128.266 kb on - strand at 128.282 kb on - strand at 128.336 kb on + strand at 128.342 kb on - strand at 128.342 kb on - strand at 128.387 kb on + strand at 128.387 kb on + strand at 128.400 kb on - strand at 128.400 kb on - strand at 128.400 kb on - strand at 128.582 kb on + strand, within H281DRAFT_05173 at 128.652 kb on + strand, within H281DRAFT_05173 at 128.652 kb on + strand, within H281DRAFT_05173 at 128.656 kb on + strand, within H281DRAFT_05173 at 128.702 kb on + strand, within H281DRAFT_05173 at 128.717 kb on + strand, within H281DRAFT_05173
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 126,727 + H281DRAFT_05171 0.45 +0.3 126,727 + H281DRAFT_05171 0.45 +1.0 126,727 + H281DRAFT_05171 0.45 -0.1 126,728 - H281DRAFT_05171 0.45 -0.6 126,728 - H281DRAFT_05171 0.45 -0.2 126,728 - -0.4 126,728 - H281DRAFT_05171 0.45 -0.0 127,163 - H281DRAFT_05171 0.72 +0.6 127,180 + H281DRAFT_05171 0.73 +0.2 127,180 + H281DRAFT_05171 0.73 +0.1 127,181 - H281DRAFT_05171 0.74 +0.2 127,181 - H281DRAFT_05171 0.74 -0.5 127,568 - +1.1 127,769 + H281DRAFT_05172 0.11 +0.7 127,992 + H281DRAFT_05172 0.56 +0.6 127,993 - H281DRAFT_05172 0.56 +0.2 128,265 + +0.1 128,265 + +0.7 128,266 - +2.4 128,266 - +0.5 128,282 - -0.1 128,336 + -0.3 128,342 - -0.1 128,342 - +0.5 128,387 + +0.1 128,387 + -0.2 128,400 - +0.4 128,400 - -0.4 128,400 - +0.8 128,582 + H281DRAFT_05173 0.14 +0.4 128,652 + H281DRAFT_05173 0.19 +0.8 128,652 + H281DRAFT_05173 0.19 -0.6 128,656 + H281DRAFT_05173 0.20 -0.5 128,702 + H281DRAFT_05173 0.23 +0.1 128,717 + H281DRAFT_05173 0.24 +0.0
Or see this region's nucleotide sequence