Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04855

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04854 and H281DRAFT_04855 are separated by 772 nucleotides H281DRAFT_04854: H281DRAFT_04854 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 299,488 to 301,137 _04854 H281DRAFT_04855: H281DRAFT_04855 - hypothetical protein, at 301,910 to 302,293 _04855 Position (kb) 301 302 303Strain fitness (log2 ratio) -1 0 1at 301.078 kb on + strandat 301.118 kb on + strandat 301.119 kb on - strandat 301.119 kb on - strandat 301.119 kb on - strandat 301.132 kb on - strandat 301.135 kb on + strandat 301.135 kb on + strandat 301.136 kb on - strandat 301.176 kb on + strandat 301.176 kb on + strandat 301.177 kb on - strandat 301.371 kb on + strandat 301.602 kb on + strandat 301.603 kb on - strandat 301.603 kb on - strandat 301.654 kb on + strandat 301.680 kb on + strandat 301.681 kb on - strandat 301.820 kb on - strandat 301.858 kb on - strandat 301.895 kb on + strandat 301.924 kb on + strandat 302.108 kb on + strand, within H281DRAFT_04855at 302.255 kb on - strandat 302.258 kb on + strandat 302.259 kb on - strandat 302.259 kb on - strandat 302.277 kb on - strandat 302.279 kb on - strandat 302.386 kb on + strandat 302.503 kb on + strandat 302.504 kb on - strandat 302.513 kb on - strandat 302.736 kb on + strandat 302.804 kb on + strandat 302.805 kb on - strandat 302.805 kb on - strandat 302.933 kb on + strandat 302.934 kb on - strandat 302.934 kb on - strandat 303.051 kb on + strandat 303.088 kb on + strandat 303.093 kb on + strandat 303.188 kb on + strandat 303.192 kb on + strandat 303.192 kb on + strandat 303.192 kb on + strandat 303.192 kb on + strandat 303.193 kb on - strandat 303.193 kb on - strandat 303.196 kb on - strandat 303.284 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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301,078 + +0.2
301,118 + +0.8
301,119 - +0.2
301,119 - +0.9
301,119 - -0.6
301,132 - +0.3
301,135 + -0.2
301,135 + +0.8
301,136 - -0.1
301,176 + -0.5
301,176 + +0.2
301,177 - +0.1
301,371 + +0.2
301,602 + +0.1
301,603 - +0.1
301,603 - -0.4
301,654 + +0.1
301,680 + +0.3
301,681 - +0.4
301,820 - -0.1
301,858 - +0.3
301,895 + -0.2
301,924 + +0.1
302,108 + H281DRAFT_04855 0.52 +0.7
302,255 - +0.7
302,258 + +0.8
302,259 - +0.9
302,259 - +0.4
302,277 - -0.1
302,279 - -0.3
302,386 + +0.4
302,503 + +1.2
302,504 - +0.1
302,513 - +0.8
302,736 + +0.5
302,804 + +0.4
302,805 - +0.3
302,805 - +0.7
302,933 + -0.4
302,934 - -0.0
302,934 - +1.2
303,051 + -0.1
303,088 + +1.1
303,093 + +0.4
303,188 + -0.0
303,192 + -0.6
303,192 + +0.2
303,192 + +0.2
303,192 + +0.3
303,193 - +0.5
303,193 - +0.3
303,196 - +0.5
303,284 - +0.2

Or see this region's nucleotide sequence