Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03879 and H281DRAFT_03880 are separated by 244 nucleotides H281DRAFT_03880 and H281DRAFT_03881 are separated by 14 nucleotides H281DRAFT_03881 and H281DRAFT_03882 are separated by 26 nucleotides H281DRAFT_03882 and H281DRAFT_03883 are separated by 103 nucleotides
H281DRAFT_03879: H281DRAFT_03879 - xylose ABC transporter membrane protein, at 408,779 to 409,978
_03879
H281DRAFT_03880: H281DRAFT_03880 - isoquinoline 1-oxidoreductase, beta subunit, at 410,223 to 412,490
_03880
H281DRAFT_03881: H281DRAFT_03881 - isoquinoline 1-oxidoreductase, alpha subunit, at 412,505 to 412,963
_03881
H281DRAFT_03882: H281DRAFT_03882 - hypothetical protein, at 412,990 to 413,082
_03882
H281DRAFT_03883: H281DRAFT_03883 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 413,186 to 414,778
_03883
Position (kb) 410
411
412
413 Strain fitness (log2 ratio) -1
0
1 at 409.319 kb on + strand, within H281DRAFT_03879 at 409.599 kb on - strand, within H281DRAFT_03879 at 409.898 kb on + strand at 410.143 kb on + strand at 410.144 kb on - strand at 410.146 kb on + strand at 410.150 kb on - strand at 410.150 kb on - strand at 410.776 kb on - strand, within H281DRAFT_03880 at 410.798 kb on + strand, within H281DRAFT_03880 at 411.090 kb on - strand, within H281DRAFT_03880 at 411.166 kb on + strand, within H281DRAFT_03880 at 411.333 kb on + strand, within H281DRAFT_03880 at 411.443 kb on - strand, within H281DRAFT_03880 at 411.531 kb on + strand, within H281DRAFT_03880 at 411.532 kb on - strand, within H281DRAFT_03880 at 412.703 kb on - strand, within H281DRAFT_03881 at 412.893 kb on + strand, within H281DRAFT_03881 at 412.893 kb on + strand, within H281DRAFT_03881 at 412.894 kb on - strand, within H281DRAFT_03881 at 412.894 kb on - strand, within H281DRAFT_03881 at 413.083 kb on - strand at 413.119 kb on + strand at 413.119 kb on + strand at 413.120 kb on - strand at 413.168 kb on + strand at 413.369 kb on + strand, within H281DRAFT_03883 at 413.370 kb on - strand, within H281DRAFT_03883
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 409,319 + H281DRAFT_03879 0.45 -0.1 409,599 - H281DRAFT_03879 0.68 +0.5 409,898 + +0.2 410,143 + +0.7 410,144 - +0.8 410,146 + -0.0 410,150 - +0.2 410,150 - +0.6 410,776 - H281DRAFT_03880 0.24 +0.1 410,798 + H281DRAFT_03880 0.25 +0.2 411,090 - H281DRAFT_03880 0.38 +0.2 411,166 + H281DRAFT_03880 0.42 +0.8 411,333 + H281DRAFT_03880 0.49 +0.8 411,443 - H281DRAFT_03880 0.54 +0.6 411,531 + H281DRAFT_03880 0.58 +0.2 411,532 - H281DRAFT_03880 0.58 +0.7 412,703 - H281DRAFT_03881 0.43 -0.2 412,893 + H281DRAFT_03881 0.85 +1.3 412,893 + H281DRAFT_03881 0.85 +0.4 412,894 - H281DRAFT_03881 0.85 +0.3 412,894 - H281DRAFT_03881 0.85 +0.5 413,083 - -0.2 413,119 + +0.4 413,119 + -0.7 413,120 - +1.4 413,168 + +0.5 413,369 + H281DRAFT_03883 0.11 +0.3 413,370 - H281DRAFT_03883 0.12 +1.0
Or see this region's nucleotide sequence