Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03846 and H281DRAFT_03847 are separated by 15 nucleotides H281DRAFT_03847 and H281DRAFT_03848 are separated by 346 nucleotides
H281DRAFT_03846: H281DRAFT_03846 - 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit, at 375,166 to 376,425
_03846
H281DRAFT_03847: H281DRAFT_03847 - transcriptional regulator, LysR family, at 376,441 to 377,415
_03847
H281DRAFT_03848: H281DRAFT_03848 - MFS transporter, AAHS family, 4-hydroxybenzoate transporter, at 377,762 to 378,982
_03848
Position (kb) 376
377
378 Strain fitness (log2 ratio) -1
0
1 at 375.467 kb on - strand, within H281DRAFT_03846 at 375.726 kb on + strand, within H281DRAFT_03846 at 375.753 kb on + strand, within H281DRAFT_03846 at 375.753 kb on + strand, within H281DRAFT_03846 at 376.012 kb on + strand, within H281DRAFT_03846 at 376.300 kb on - strand at 376.344 kb on - strand at 376.490 kb on + strand at 376.580 kb on + strand, within H281DRAFT_03847 at 376.640 kb on + strand, within H281DRAFT_03847 at 376.952 kb on + strand, within H281DRAFT_03847 at 377.297 kb on - strand, within H281DRAFT_03847 at 377.670 kb on - strand at 377.788 kb on - strand at 378.054 kb on + strand, within H281DRAFT_03848
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 375,467 - H281DRAFT_03846 0.24 +1.3 375,726 + H281DRAFT_03846 0.44 -0.3 375,753 + H281DRAFT_03846 0.47 +1.4 375,753 + H281DRAFT_03846 0.47 +0.6 376,012 + H281DRAFT_03846 0.67 -0.1 376,300 - +0.3 376,344 - +0.1 376,490 + +0.4 376,580 + H281DRAFT_03847 0.14 +0.5 376,640 + H281DRAFT_03847 0.20 +0.5 376,952 + H281DRAFT_03847 0.52 +0.5 377,297 - H281DRAFT_03847 0.88 +0.5 377,670 - -1.6 377,788 - +0.4 378,054 + H281DRAFT_03848 0.24 +0.3
Or see this region's nucleotide sequence