Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02612 and H281DRAFT_02613 are separated by 21 nucleotides H281DRAFT_02613 and H281DRAFT_02614 overlap by 4 nucleotides H281DRAFT_02614 and H281DRAFT_02615 are separated by 24 nucleotides
H281DRAFT_02612: H281DRAFT_02612 - Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase, at 189,476 to 190,528
_02612
H281DRAFT_02613: H281DRAFT_02613 - amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-), at 190,550 to 191,299
_02613
H281DRAFT_02614: H281DRAFT_02614 - L-glutamine ABC transporter membrane protein, at 191,296 to 191,952
_02614
H281DRAFT_02615: H281DRAFT_02615 - glutamine transport system substrate-binding protein, at 191,977 to 192,723
_02615
Position (kb) 190
191
192 Strain fitness (log2 ratio) -1
0
1
2 at 189.572 kb on + strand at 189.573 kb on - strand at 189.643 kb on + strand, within H281DRAFT_02612 at 190.075 kb on + strand, within H281DRAFT_02612 at 190.076 kb on - strand at 190.076 kb on - strand, within H281DRAFT_02612 at 190.437 kb on + strand at 190.438 kb on - strand at 190.508 kb on + strand at 190.634 kb on - strand, within H281DRAFT_02613 at 190.634 kb on - strand, within H281DRAFT_02613 at 190.634 kb on - strand, within H281DRAFT_02613 at 190.634 kb on - strand, within H281DRAFT_02613 at 190.875 kb on + strand, within H281DRAFT_02613 at 190.875 kb on + strand, within H281DRAFT_02613 at 191.186 kb on + strand, within H281DRAFT_02613 at 191.299 kb on + strand at 191.452 kb on + strand, within H281DRAFT_02614 at 191.816 kb on + strand, within H281DRAFT_02614 at 191.817 kb on - strand, within H281DRAFT_02614 at 192.170 kb on + strand, within H281DRAFT_02615 at 192.171 kb on - strand, within H281DRAFT_02615 at 192.171 kb on - strand, within H281DRAFT_02615 at 192.171 kb on - strand, within H281DRAFT_02615 at 192.173 kb on + strand, within H281DRAFT_02615 at 192.173 kb on + strand, within H281DRAFT_02615
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 189,572 + -0.2 189,573 - -1.4 189,643 + H281DRAFT_02612 0.16 +0.3 190,075 + H281DRAFT_02612 0.57 -0.4 190,076 - -0.5 190,076 - H281DRAFT_02612 0.57 -0.0 190,437 + +0.0 190,438 - +0.2 190,508 + +1.6 190,634 - H281DRAFT_02613 0.11 +0.5 190,634 - H281DRAFT_02613 0.11 +0.1 190,634 - H281DRAFT_02613 0.11 +0.1 190,634 - H281DRAFT_02613 0.11 +0.3 190,875 + H281DRAFT_02613 0.43 +1.0 190,875 + H281DRAFT_02613 0.43 +0.7 191,186 + H281DRAFT_02613 0.85 +1.0 191,299 + +0.4 191,452 + H281DRAFT_02614 0.24 +2.2 191,816 + H281DRAFT_02614 0.79 +0.0 191,817 - H281DRAFT_02614 0.79 +0.1 192,170 + H281DRAFT_02615 0.26 +0.5 192,171 - H281DRAFT_02615 0.26 +0.3 192,171 - H281DRAFT_02615 0.26 -0.1 192,171 - H281DRAFT_02615 0.26 -0.3 192,173 + H281DRAFT_02615 0.26 +0.3 192,173 + H281DRAFT_02615 0.26 +0.0
Or see this region's nucleotide sequence