Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02237 and H281DRAFT_02238 are separated by 168 nucleotides H281DRAFT_02238 and H281DRAFT_02239 are separated by 104 nucleotides H281DRAFT_02239 and H281DRAFT_02240 are separated by 113 nucleotides
H281DRAFT_02237: H281DRAFT_02237 - 16S rRNA (cytosine967-C5)-methyltransferase, at 381,601 to 383,040
_02237
H281DRAFT_02238: H281DRAFT_02238 - Heat shock protein. Metallo peptidase. MEROPS family M48B, at 383,209 to 384,066
_02238
H281DRAFT_02239: H281DRAFT_02239 - resistance to homoserine/threonine (RhtB) family protein, at 384,171 to 384,812
_02239
H281DRAFT_02240: H281DRAFT_02240 - methionyl-tRNA formyltransferase (EC 2.1.2.9), at 384,926 to 385,912
_02240
Position (kb) 383
384
385 Strain fitness (log2 ratio) -1
0
1
2 at 382.380 kb on - strand, within H281DRAFT_02237 at 382.380 kb on - strand, within H281DRAFT_02237 at 382.380 kb on - strand, within H281DRAFT_02237 at 382.670 kb on + strand, within H281DRAFT_02237 at 383.032 kb on + strand at 383.033 kb on - strand at 383.093 kb on + strand at 383.093 kb on + strand at 383.093 kb on + strand at 383.093 kb on + strand at 383.094 kb on - strand at 383.094 kb on - strand at 383.094 kb on - strand at 383.159 kb on - strand at 383.583 kb on + strand, within H281DRAFT_02238 at 383.584 kb on - strand, within H281DRAFT_02238 at 383.801 kb on + strand, within H281DRAFT_02238 at 383.801 kb on + strand, within H281DRAFT_02238 at 383.856 kb on - strand, within H281DRAFT_02238 at 383.897 kb on + strand, within H281DRAFT_02238 at 383.898 kb on - strand, within H281DRAFT_02238 at 384.131 kb on + strand at 384.131 kb on + strand at 384.131 kb on + strand at 384.132 kb on - strand at 384.132 kb on - strand at 384.136 kb on + strand at 384.137 kb on - strand at 384.143 kb on + strand at 384.143 kb on + strand at 384.143 kb on + strand at 384.143 kb on + strand at 384.144 kb on - strand at 384.144 kb on - strand at 384.147 kb on + strand at 384.147 kb on + strand at 384.147 kb on + strand at 384.150 kb on - strand at 384.150 kb on - strand at 384.333 kb on + strand, within H281DRAFT_02239 at 384.334 kb on - strand, within H281DRAFT_02239 at 384.435 kb on + strand, within H281DRAFT_02239 at 384.435 kb on + strand, within H281DRAFT_02239 at 384.435 kb on + strand, within H281DRAFT_02239 at 384.435 kb on + strand, within H281DRAFT_02239 at 384.436 kb on - strand, within H281DRAFT_02239 at 384.436 kb on - strand, within H281DRAFT_02239 at 384.436 kb on - strand, within H281DRAFT_02239 at 384.436 kb on - strand, within H281DRAFT_02239 at 384.556 kb on + strand, within H281DRAFT_02239 at 384.556 kb on + strand, within H281DRAFT_02239 at 384.557 kb on - strand, within H281DRAFT_02239 at 384.565 kb on + strand, within H281DRAFT_02239 at 384.732 kb on - strand, within H281DRAFT_02239 at 384.732 kb on - strand at 384.732 kb on - strand, within H281DRAFT_02239 at 384.732 kb on - strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.733 kb on + strand, within H281DRAFT_02239 at 384.734 kb on - strand, within H281DRAFT_02239 at 384.734 kb on - strand, within H281DRAFT_02239 at 384.734 kb on - strand, within H281DRAFT_02239 at 384.927 kb on + strand at 384.927 kb on + strand at 384.927 kb on + strand at 384.927 kb on + strand at 384.928 kb on - strand at 384.928 kb on - strand at 384.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 382,380 - H281DRAFT_02237 0.54 +0.5 382,380 - H281DRAFT_02237 0.54 -0.8 382,380 - H281DRAFT_02237 0.54 +0.3 382,670 + H281DRAFT_02237 0.74 -0.6 383,032 + -0.4 383,033 - +0.1 383,093 + +0.8 383,093 + -0.4 383,093 + -0.1 383,093 + +0.1 383,094 - +0.1 383,094 - +0.4 383,094 - -0.1 383,159 - +0.3 383,583 + H281DRAFT_02238 0.44 -0.2 383,584 - H281DRAFT_02238 0.44 -0.2 383,801 + H281DRAFT_02238 0.69 +1.6 383,801 + H281DRAFT_02238 0.69 +0.8 383,856 - H281DRAFT_02238 0.75 +0.1 383,897 + H281DRAFT_02238 0.80 +0.4 383,898 - H281DRAFT_02238 0.80 +1.3 384,131 + +0.8 384,131 + +0.5 384,131 + +0.5 384,132 - +0.7 384,132 - +0.3 384,136 + +0.8 384,137 - +1.1 384,143 + +2.0 384,143 + +0.3 384,143 + +0.0 384,143 + -0.2 384,144 - +0.2 384,144 - -1.1 384,147 + -0.2 384,147 + -0.0 384,147 + -0.1 384,150 - +0.1 384,150 - +0.3 384,333 + H281DRAFT_02239 0.25 -0.1 384,334 - H281DRAFT_02239 0.25 +0.1 384,435 + H281DRAFT_02239 0.41 +0.3 384,435 + H281DRAFT_02239 0.41 -0.1 384,435 + H281DRAFT_02239 0.41 +0.2 384,435 + H281DRAFT_02239 0.41 -0.1 384,436 - H281DRAFT_02239 0.41 -0.0 384,436 - H281DRAFT_02239 0.41 +0.0 384,436 - H281DRAFT_02239 0.41 -0.3 384,436 - H281DRAFT_02239 0.41 +0.8 384,556 + H281DRAFT_02239 0.60 -0.5 384,556 + H281DRAFT_02239 0.60 +0.4 384,557 - H281DRAFT_02239 0.60 +1.1 384,565 + H281DRAFT_02239 0.61 -0.7 384,732 - H281DRAFT_02239 0.87 -0.1 384,732 - +0.5 384,732 - H281DRAFT_02239 0.87 +1.0 384,732 - H281DRAFT_02239 0.87 -0.6 384,733 + H281DRAFT_02239 0.88 +0.4 384,733 + H281DRAFT_02239 0.88 +0.4 384,733 + H281DRAFT_02239 0.88 +0.1 384,733 + H281DRAFT_02239 0.88 +0.6 384,733 + H281DRAFT_02239 0.88 -0.9 384,733 + H281DRAFT_02239 0.88 -0.3 384,733 + H281DRAFT_02239 0.88 -0.1 384,733 + H281DRAFT_02239 0.88 +0.6 384,733 + H281DRAFT_02239 0.88 -0.9 384,733 + H281DRAFT_02239 0.88 -0.1 384,733 + H281DRAFT_02239 0.88 -0.1 384,734 - H281DRAFT_02239 0.88 -0.7 384,734 - H281DRAFT_02239 0.88 -0.2 384,734 - H281DRAFT_02239 0.88 +0.3 384,927 + -0.1 384,927 + -0.1 384,927 + +0.4 384,927 + +0.3 384,928 - -0.1 384,928 - +0.3 384,928 - -0.8
Or see this region's nucleotide sequence