Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01725 and H281DRAFT_01726 are separated by 40 nucleotides H281DRAFT_01726 and H281DRAFT_01727 are separated by 271 nucleotides H281DRAFT_01727 and H281DRAFT_01728 are separated by 126 nucleotides
H281DRAFT_01725: H281DRAFT_01725 - ADP-heptose:LPS heptosyltransferase, at 614,127 to 615,296
_01725
H281DRAFT_01726: H281DRAFT_01726 - transcriptional regulator, TetR family, at 615,337 to 615,915
_01726
H281DRAFT_01727: H281DRAFT_01727 - Short-chain dehydrogenase, at 616,187 to 616,891
_01727
H281DRAFT_01728: H281DRAFT_01728 - transcriptional regulator, LysR family, at 617,018 to 617,947
_01728
Position (kb) 616
617 Strain fitness (log2 ratio) -2
-1
0
1
2 at 615.192 kb on + strand at 615.192 kb on + strand at 615.192 kb on + strand at 615.193 kb on - strand at 615.193 kb on - strand at 615.193 kb on - strand at 615.193 kb on - strand at 615.193 kb on - strand at 615.294 kb on + strand at 615.294 kb on + strand at 615.322 kb on - strand at 615.348 kb on + strand at 615.663 kb on - strand, within H281DRAFT_01726 at 615.773 kb on + strand, within H281DRAFT_01726 at 615.789 kb on + strand at 616.096 kb on + strand at 616.286 kb on + strand at 616.681 kb on + strand, within H281DRAFT_01727 at 616.717 kb on + strand, within H281DRAFT_01727 at 616.781 kb on + strand, within H281DRAFT_01727 at 616.866 kb on - strand at 617.100 kb on + strand at 617.100 kb on + strand at 617.115 kb on + strand, within H281DRAFT_01728 at 617.116 kb on - strand, within H281DRAFT_01728 at 617.118 kb on + strand, within H281DRAFT_01728 at 617.118 kb on + strand, within H281DRAFT_01728 at 617.118 kb on + strand, within H281DRAFT_01728 at 617.119 kb on - strand, within H281DRAFT_01728 at 617.214 kb on + strand, within H281DRAFT_01728 at 617.219 kb on + strand, within H281DRAFT_01728 at 617.331 kb on + strand, within H281DRAFT_01728 at 617.418 kb on + strand, within H281DRAFT_01728 at 617.564 kb on - strand, within H281DRAFT_01728 at 617.652 kb on - strand, within H281DRAFT_01728
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 615,192 + -1.2 615,192 + +0.7 615,192 + -0.6 615,193 - -0.0 615,193 - -0.9 615,193 - +0.1 615,193 - -1.3 615,193 - -0.5 615,294 + -0.2 615,294 + -1.8 615,322 - +0.1 615,348 + -0.2 615,663 - H281DRAFT_01726 0.56 +0.7 615,773 + H281DRAFT_01726 0.75 -0.1 615,789 + +2.1 616,096 + -0.2 616,286 + -0.1 616,681 + H281DRAFT_01727 0.70 +0.3 616,717 + H281DRAFT_01727 0.75 +0.9 616,781 + H281DRAFT_01727 0.84 +0.3 616,866 - -0.3 617,100 + -0.4 617,100 + +0.0 617,115 + H281DRAFT_01728 0.10 +0.0 617,116 - H281DRAFT_01728 0.11 +0.6 617,118 + H281DRAFT_01728 0.11 +0.2 617,118 + H281DRAFT_01728 0.11 +0.4 617,118 + H281DRAFT_01728 0.11 -0.1 617,119 - H281DRAFT_01728 0.11 +0.3 617,214 + H281DRAFT_01728 0.21 -0.4 617,219 + H281DRAFT_01728 0.22 -0.2 617,331 + H281DRAFT_01728 0.34 +0.3 617,418 + H281DRAFT_01728 0.43 -0.5 617,564 - H281DRAFT_01728 0.59 -1.3 617,652 - H281DRAFT_01728 0.68 +0.6
Or see this region's nucleotide sequence