Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25900

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS25885 and BWI76_RS25890 are separated by 124 nucleotidesBWI76_RS25890 and BWI76_RS25895 are separated by 7 nucleotidesBWI76_RS25895 and BWI76_RS25900 overlap by 1 nucleotidesBWI76_RS25900 and BWI76_RS25905 overlap by 1 nucleotidesBWI76_RS25905 and BWI76_RS25910 are separated by 166 nucleotides BWI76_RS25885: BWI76_RS25885 - 30S ribosomal protein S12, at 5,355,700 to 5,356,074 _RS25885 BWI76_RS25890: BWI76_RS25890 - sulfurtransferase TusB, at 5,356,199 to 5,356,486 _RS25890 BWI76_RS25895: BWI76_RS25895 - sulfurtransferase TusC, at 5,356,494 to 5,356,853 _RS25895 BWI76_RS25900: BWI76_RS25900 - sulfurtransferase TusD, at 5,356,853 to 5,357,239 _RS25900 BWI76_RS25905: BWI76_RS25905 - hypothetical protein, at 5,357,239 to 5,357,961 _RS25905 BWI76_RS25910: BWI76_RS25910 - peptidyl-prolyl cis-trans isomerase, at 5,358,128 to 5,358,946 _RS25910 Position (kb) 5356 5357 5358Strain fitness (log2 ratio) -1 0 1at 5357.275 kb on - strandat 5357.869 kb on - strand, within BWI76_RS25905at 5358.166 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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5,357,275 - +0.3
5,357,869 - BWI76_RS25905 0.87 +0.0
5,358,166 - +1.2

Or see this region's nucleotide sequence