Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22295

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22290 and BWI76_RS22295 are separated by 26 nucleotidesBWI76_RS22295 and BWI76_RS22300 are separated by 212 nucleotidesBWI76_RS22300 and BWI76_RS22305 overlap by 8 nucleotides BWI76_RS22290: BWI76_RS22290 - PTS cellobiose/arbutin/salicin transporter subunit IIBC, at 4,646,841 to 4,648,283 _RS22290 BWI76_RS22295: BWI76_RS22295 - 6-phospho-beta-glucosidase, at 4,648,310 to 4,649,734 _RS22295 BWI76_RS22300: BWI76_RS22300 - hydrogenase 3 maturation endopeptidase HyCI, at 4,649,947 to 4,650,432 _RS22300 BWI76_RS22305: BWI76_RS22305 - formate hydrogenlyase maturation protein HycH, at 4,650,425 to 4,650,835 _RS22305 Position (kb) 4648 4649 4650Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4647.443 kb on + strand, within BWI76_RS22290at 4647.506 kb on - strand, within BWI76_RS22290at 4647.515 kb on + strand, within BWI76_RS22290at 4647.688 kb on + strand, within BWI76_RS22290at 4647.691 kb on - strand, within BWI76_RS22290at 4647.691 kb on - strand, within BWI76_RS22290at 4647.691 kb on - strand, within BWI76_RS22290at 4648.094 kb on + strand, within BWI76_RS22290at 4648.139 kb on + strandat 4648.212 kb on - strandat 4648.212 kb on - strandat 4648.301 kb on + strandat 4648.586 kb on - strand, within BWI76_RS22295at 4648.819 kb on - strand, within BWI76_RS22295at 4648.833 kb on + strand, within BWI76_RS22295at 4649.018 kb on - strand, within BWI76_RS22295at 4649.040 kb on - strand, within BWI76_RS22295at 4649.119 kb on - strand, within BWI76_RS22295at 4649.173 kb on - strand, within BWI76_RS22295at 4649.251 kb on - strand, within BWI76_RS22295at 4649.368 kb on + strand, within BWI76_RS22295at 4649.552 kb on + strand, within BWI76_RS22295at 4649.559 kb on - strand, within BWI76_RS22295at 4649.614 kb on + strandat 4649.774 kb on - strandat 4649.995 kb on + strandat 4650.366 kb on - strand, within BWI76_RS22300at 4650.494 kb on - strand, within BWI76_RS22305

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,647,443 + BWI76_RS22290 0.42 -0.5
4,647,506 - BWI76_RS22290 0.46 +1.4
4,647,515 + BWI76_RS22290 0.47 +0.2
4,647,688 + BWI76_RS22290 0.59 -0.7
4,647,691 - BWI76_RS22290 0.59 +0.6
4,647,691 - BWI76_RS22290 0.59 -2.9
4,647,691 - BWI76_RS22290 0.59 +0.2
4,648,094 + BWI76_RS22290 0.87 +0.7
4,648,139 + +1.3
4,648,212 - +0.7
4,648,212 - +1.9
4,648,301 + +0.8
4,648,586 - BWI76_RS22295 0.19 +1.3
4,648,819 - BWI76_RS22295 0.36 +3.2
4,648,833 + BWI76_RS22295 0.37 +2.2
4,649,018 - BWI76_RS22295 0.50 +0.9
4,649,040 - BWI76_RS22295 0.51 -0.5
4,649,119 - BWI76_RS22295 0.57 -0.0
4,649,173 - BWI76_RS22295 0.61 +0.8
4,649,251 - BWI76_RS22295 0.66 +0.5
4,649,368 + BWI76_RS22295 0.74 +0.3
4,649,552 + BWI76_RS22295 0.87 -1.6
4,649,559 - BWI76_RS22295 0.88 +1.7
4,649,614 + -1.8
4,649,774 - -0.2
4,649,995 + +0.1
4,650,366 - BWI76_RS22300 0.86 -0.4
4,650,494 - BWI76_RS22305 0.17 -2.5

Or see this region's nucleotide sequence